Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00783 and BSU04560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:11
# Commandline: needle
# -asequence dna-align/BSNT_00783___ddl.1.22522.seq
# -bsequence dna-align/BSU04560___ddl.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00783___ddl-BSU04560___ddl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00783___ddl-BSU04560___ddl.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00783___ddl
# 2: BSU04560___ddl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1086
# Identity: 1046/1086 (96.3%)
# Similarity: 1046/1086 (96.3%)
# Gaps: 21/1086 ( 1.9%)
# Score: 5154.0
#
#
#=======================================
BSNT_00783___ 1 TTGAAAACAAGTCTAGGATTAGTGTACGGAGGAAAGTCGGCAGAACATAA 50
|||||||||||||||||||||||||||||
BSU04560___dd 1 ---------------------GTGTACGGAGGAAAGTCGGCAGAACATAA 29
BSNT_00783___ 51 TGTTTCCCTGCAGACGGCTCTGGCTGTAATCAAAGCGCTAAATACTGAGA 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04560___dd 30 TGTTTCCCTGCAGACAGCTCTGGCTGTAATCAAAGCGCTAAATACTGAGA 79
BSNT_00783___ 101 AGTTTGATATACATCCGATTTATATAACAGAAAAAGGCGAATGGGTAAGA 150
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU04560___dd 80 AGTTTGATATACATCCGATTTATATAACAGAAAAAGGCGAATGGGTTAGA 129
BSNT_00783___ 151 GGCGCCCGTTTAACTGAGCCTGTTTCAAATGTGAAAATGCTTCAATTTGA 200
|||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU04560___dd 130 GGCGCCCGTTTAACTGAACCTGTTTCAAACGTGAAAATGCTTCAATTTGA 179
BSNT_00783___ 201 GCAAGGAGGCAGTGCTTTTTCTCCAGCTGCCCTGAACCAGGAGATGTTTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 180 GCAAGGAGGCAGTGCTTTTTCTCCAGCTGCCCTGAACCAGGAGATGTTTC 229
BSNT_00783___ 251 CGCAGGAAGCGTCACAGCAAAATGAAGCCATCGACGTCGTATTCCCGCTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 230 CGCAGGAAGCGTCACAGCAAAATGAAGCCATCGACGTCGTATTCCCGCTC 279
BSNT_00783___ 301 CTCCACGGACCGAATGGAGAAGACGGTACGATCCAGGGAATGCTTGAGCT 350
||||||||||||||.|||||||||||||||||||||||||||||.|||||
BSU04560___dd 280 CTCCACGGACCGAACGGAGAAGACGGTACGATCCAGGGAATGCTCGAGCT 329
BSNT_00783___ 351 GTTGAACATTCCTTATGTCGGCAACGGAGTGCTTGCTTCCTCAGCTGGGA 400
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04560___dd 330 GTTGAACATTCCTTATGTCGGCAACGGAGTGCTTGCTTCCTCAGCTGGCA 379
BSNT_00783___ 401 TGGATAAAGTTGTCATGAAACATTTATTTGCGCAGGCTGGCCTTGCTCAG 450
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU04560___dd 380 TGGATAAAGTTGTCATGAAACATTTATTTGCGCAGGTTGGCCTTGCTCAG 429
BSNT_00783___ 451 GCTAAATACGCAGCTTTCCTTAAGAAAGACTGGACTCGTTCTCCGAAAGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 430 GCTAAATACGCAGCTTTCCTTAAGAAAGACTGGACTCGTTCTCCGAAAGA 479
BSNT_00783___ 501 AAGCTGTGAGCAGGTTGAACAGGAATTAGGCTACCCTTGCTTCGTAAAAC 550
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04560___dd 480 AAGCTGTGAGGAGGTTGAACAGGAATTAGGCTACCCTTGCTTCGTAAAAC 529
BSNT_00783___ 551 CGGCGAACCTCGGCTCAAGTGTTGGAATCAGCAAATGCCGAAACCGTGAA 600
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU04560___dd 530 CGGCGAACCTCGGCTCAAGTGTCGGAATCAGCAAATGCCGAAACCGTGAA 579
BSNT_00783___ 601 GAACTGCAAAAAGCGTTTGAGCTTGCTTTCCAATATGACCGCAAAGTCGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 580 GAACTGCAAAAAGCGTTTGAGCTTGCTTTCCAATATGACCGCAAAGTCGT 629
BSNT_00783___ 651 CGTTGAAGAAGGAATTAACGGCCGCGAGATTGAGATCGGCGTTCTTGGAA 700
||||||||||||||||||||||||||||||.||.||||||||||||||||
BSU04560___dd 630 CGTTGAAGAAGGAATTAACGGCCGCGAGATCGAAATCGGCGTTCTTGGAA 679
BSNT_00783___ 701 ATGACGATCCTAAATGCTCTGTTGTGGGAGAAATCGCACCGAAGACAGAT 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 680 ATGATGATCCTAAATGCTCTGTTGTGGGAGAAATCGCACCGAAGACAGAT 729
BSNT_00783___ 751 TTCTACGATTACAAAGCGAAATATGAGGATGGAGATACTGATCTGATGAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 730 TTCTACGATTACAAAGCGAAATATGAGGATGGAGATACTGATCTGATGAT 779
BSNT_00783___ 801 TCCGGCAATTGTGACCGATGAGGAATACGCTACAATCAGTGATATGGCGA 850
||||||.||||||||.||||||||||||||.|||||||||||||||||||
BSU04560___dd 780 TCCGGCGATTGTGACTGATGAGGAATACGCAACAATCAGTGATATGGCGA 829
BSNT_00783___ 851 TCAAGGCGTTTAAAGCGATCGATGGTTCAGGACTCGTCAGAGCGGACTTT 900
||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU04560___dd 830 TCAAAGCGTTTAAAGCGATCGACGGTTCAGGACTCGTCAGAGCGGACTTT 879
BSNT_00783___ 901 TTCCTGACAGCTGACGGCGAAGTTCTGATCAATGAAGTCAACACAATGCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 880 TTCCTGACAGCTGACGGCGAAGTTCTGATCAATGAAGTCAACACAATGCC 929
BSNT_00783___ 951 TGGCTTTACACCTTTCAGCATGTTCCCGCTGCTCTGGAAAGAAGCCGGAG 1000
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04560___dd 930 TGGCTTTACACCTTTCAGCATGTTCCCGTTGCTCTGGAAAGAAGCCGGAG 979
BSNT_00783___ 1001 TGGAATATGCTGACCTGATTGAACAGCTTGTGGAGCTTGCAAAAGAACGC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04560___dd 980 TGGAATATGCTGACCTGATTGAACAGCTTGTGGAGCTTGCAAAAGAACGC 1029
BSNT_00783___ 1051 CACGCTGAAAAACAATTGATTAAGCATACATTCTAA 1086
||||||||||||||||||||||||||||||||||||
BSU04560___dd 1030 CACGCTGAAAAACAATTGATTAAGCATACATTCTAA 1065
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