Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00781 and BSU04550

See Amino acid alignment / Visit BSNT_00781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence dna-align/BSNT_00781___ydbP.1.22522.seq
#    -bsequence dna-align/BSU04550___ydbP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00781___ydbP-BSU04550___ydbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00781___ydbP-BSU04550___ydbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00781___ydbP
# 2: BSU04550___ydbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     319/321 (99.4%)
# Similarity:   319/321 (99.4%)
# Gaps:           0/321 ( 0.0%)
# Score: 1587.0
# 
#
#=======================================

BSNT_00781___      1 ATGAAAAAAATCACAACAAACGAACAATTTAATGAACTGATTCAATCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04550___yd      1 ATGAAAAAAATCACAACAAACGAACAATTTAATGAACTGATTCAATCTGA     50

BSNT_00781___     51 TAAAGAAATCATTGTAAAGTTTTATGCTGATTGGTGCCCAGACTGCACAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04550___yd     51 TAAAGAAATCATTGTAAAGTTTTATGCTGATTGGTGCCCAGACTGCACAC    100

BSNT_00781___    101 GCATGAATATGTTCATCGGCGATATTTTGGAAGAGTACAACCAAAACGAT    150
                     ||||||||||||||||||||||||||||||||||.||||||||||||||.
BSU04550___yd    101 GCATGAATATGTTCATCGGCGATATTTTGGAAGAATACAACCAAAACGAC    150

BSNT_00781___    151 TGGTATGAGCTGAATAAGGACGAGCTTCCTGACCTGGCTGAAAAATACCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04550___yd    151 TGGTATGAGCTGAATAAGGACGAGCTTCCTGACCTGGCTGAAAAATACCA    200

BSNT_00781___    201 AGTAATGGGCATTCCCAGCCTGCTTATTTTCAAGAACGGTGAAAAAACAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04550___yd    201 AGTAATGGGCATTCCCAGCCTGCTTATTTTCAAGAACGGTGAAAAAACAG    250

BSNT_00781___    251 CTCACCTTCACAGCGCCAATGCCAAAACGCCTGAAGAAGTGACTGAATTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04550___yd    251 CTCACCTTCACAGCGCCAATGCCAAAACGCCTGAAGAAGTGACTGAATTT    300

BSNT_00781___    301 TTATCTGAACATATAAGCTAA    321
                     |||||||||||||||||||||
BSU04550___yd    301 TTATCTGAACATATAAGCTAA    321


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