Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00780 and BSU04540

See Amino acid alignment / Visit BSNT_00780 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence dna-align/BSNT_00780___ydbO.1.22522.seq
#    -bsequence dna-align/BSU04540___ydbO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00780___ydbO-BSU04540___ydbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00780___ydbO-BSU04540___ydbO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00780___ydbO
# 2: BSU04540___ydbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     868/873 (99.4%)
# Similarity:   868/873 (99.4%)
# Gaps:           0/873 ( 0.0%)
# Score: 4320.0
# 
#
#=======================================

BSNT_00780___      1 ATGGAGCGGACAGAAAATCTGAAAAAGGGAGAAAAAGGGGCGCTCCTCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd      1 ATGGAGCGGACAGAAAATCTGAAAAAGGGAGAAAAAGGGGCGCTCCTCAA     50

BSNT_00780___     51 TATTTTTGCATATGTCATTCTTGCTGTTGTAAAGCTAGTCATCGGGATTC    100
                     ||||||||||||||||||.||||||||||||||||||||.||||||||||
BSU04540___yd     51 TATTTTTGCATATGTCATCCTTGCTGTTGTAAAGCTAGTTATCGGGATTC    100

BSNT_00780___    101 TATATCATTCTGAAGCGCTGAGAGCAGACGGGTTAAATAATGGAACAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    101 TATATCATTCTGAAGCGCTGAGAGCAGACGGGTTAAATAATGGAACAGAT    150

BSNT_00780___    151 ATTGTTGCGTCAGTAGCAGTGCTGATAGGATTGCGGATTTCTCAAAGACC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    151 ATTGTTGCGTCAGTAGCAGTGCTGATAGGATTGCGGATTTCTCAAAGACC    200

BSNT_00780___    201 GGCTGACAGCGATCATCCATACGGCCATTATCGGGCTGAAACAATTTCGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    201 GGCTGACAGCGATCATCCATACGGCCATTATCGGGCTGAAACAATTTCGT    250

BSNT_00780___    251 CTCTTGTTGCGTCTTTTATTATGATGGCAGTCGGCATTGAAGTGTTAATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    251 CTCTTGTTGCGTCTTTTATTATGATGGCAGTCGGCATTGAAGTGTTAATC    300

BSNT_00780___    301 GGCGGAGGAAAAGCGATTGCGGGCGGCACAACGGAAACGCCAAATCTTAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    301 GGCGGAGGAAAAGCGATTGCGGGCGGCACAACGGAAACGCCAAATCTTAT    350

BSNT_00780___    351 CGCGGCATGGACGGCGTTAGGCAGTGCTGTGTTTATGTATGGCATCTATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    351 CGCGGCATGGACGGCGTTAGGCAGTGCTGTGTTTATGTATGGCATCTATT    400

BSNT_00780___    401 TATATAACAAAAGGCTGGCAGCGTCCATTAAAAGCTCTGCCCTGATGGCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    401 TATATAACAAAAGGCTGGCAGCGTCCATTAAAAGCTCTGCCCTGATGGCA    450

BSNT_00780___    451 GCGGCAAAGGACAGCAGGTCAGACGCTTTTGTAAGTGCCGGCGCGTTTAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    451 GCGGCAAAGGACAGCAGGTCAGACGCTTTTGTAAGTGCCGGCGCGTTTAT    500

BSNT_00780___    501 CGGTGTTTTTTCGTCCCAGCTGAAGCTGCCGTGGATTGATCCGGTAACGG    550
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU04540___yd    501 CGGTGTTTTTTCGTCCCAGCTGAAGCTGCCGTGGGTTGATCCGGTAACGG    550

BSNT_00780___    551 CTTTTATCATCGGCATCATCATTTGCAAAACTGCGTGGGATATCTTTAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    551 CTTTTATCATCGGCATCATCATTTGCAAAACTGCGTGGGATATCTTTAAA    600

BSNT_00780___    601 GACGCTTCACATTCCTTAACAGACGGCTTCCATTTAAAAGATCTTGAGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    601 GACGCTTCACATTCCTTAACAGACGGCTTCCATTTAAAAGATCTTGAGCC    650

BSNT_00780___    651 TTACAAACAGACCGTCGGCAGGATTGAAAATGTGCATCGCCTAAAGGATG    700
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU04540___yd    651 TTACAAACAGACCGTCGGCAGGATCGAAAATGTGCATCGCCTAAAGGATG    700

BSNT_00780___    701 TGAAAGCGAGGTATTTAGGCAGTACAGTTCATATCGAGATGGTGATTACG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    701 TGAAAGCGAGGTATTTAGGCAGTACAGTTCATATCGAGATGGTGATTACG    750

BSNT_00780___    751 GTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCGGATGAAGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    751 GTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCGGATGAAGT    800

BSNT_00780___    801 AGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04540___yd    801 AGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATG    850

BSNT_00780___    851 TAGAGCCCGACGACATAAAATAA    873
                     |||||||.|||||||||||||||
BSU04540___yd    851 TAGAGCCTGACGACATAAAATAA    873


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