Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00772 and BSU04500

See Amino acid alignment / Visit BSNT_00772 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence dna-align/BSNT_00772___ydbK.1.22522.seq
#    -bsequence dna-align/BSU04500___ydbK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00772___ydbK-BSU04500___ydbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00772___ydbK-BSU04500___ydbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00772___ydbK
# 2: BSU04500___ydbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     734/768 (95.6%)
# Similarity:   734/768 (95.6%)
# Gaps:          27/768 ( 3.5%)
# Score: 3642.0
# 
#
#=======================================

BSNT_00772___      1 TTGTCTAAATTAATTTGGAATGAACATATGAAACTTTTTAATCGGAAGGT     50
                                                |||||||||||||||||||||||
BSU04500___yd      1 ---------------------------ATGAAACTTTTTAATCGGAAGGT     23

BSNT_00772___     51 CACTTTGGTTTCCCTTATCCTGATGGCTGTCTTTCAATTCTTCATGGCAT    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU04500___yd     24 CACTTTGGTTTCTCTTATCCTGATGGCTGTCTTTCAATTCTTCATGGCAT     73

BSNT_00772___    101 TGATCATTAAACGGATTGTCATCAGTGCCGGAACAGATGAAAACTTCATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd     74 TGATCATTAAACGGATTGTCATCAGTGCCGGAACAGATGAAAACTTCATC    123

BSNT_00772___    151 GGCTATTTATCGTATACACCGAGCCTGAACATTTTGCTGCAGGCTTTAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    124 GGCTATTTATCGTATACACCGAGCCTGAACATTTTGCTGCAGGCTTTAAC    173

BSNT_00772___    201 GATCGTAATTGCAGCAACAATTGTTTCGATGGAATTTGATAAAAAGACGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    174 GATCGTAATTGCAGCAACAATTGTTTCGATGGAATTTGATAAAAAGACGA    223

BSNT_00772___    251 TCAAATTTTTGCTCATTCGTCCGGTTAAACGCCAAAAGGTCTTTTGGTCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    224 TCAAATTTTTGCTCATTCGTCCGGTTAAACGCCAAAAGGTCTTTTGGTCA    273

BSNT_00772___    301 AAATTAATCACAGTCGTGATGGTCAGCTTCTATTTGTATTTGGCATACTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    274 AAATTAATCACAGTCGTGATGGTCAGCTTCTATTTGTATTTGGCATACTA    323

BSNT_00772___    351 CATTCTGGCATTATTATTCGGTCTCGTGTTTTTTGGCACATCGGTGACTG    400
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04500___yd    324 CATTCTGGCATTATTATTCGGTCTCTTGTTTTTTGGCACATCGGTGACTG    373

BSNT_00772___    401 CGGAATCAAAGACATTGCTGGTCAACACTTTGGCGCTGATCGGGTCAAAC    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04500___yd    374 CGGAATCAAAGACATTGCTGGTCAACACCTTGGCGCTGATCGGGTCAAAC    423

BSNT_00772___    451 TGGCTTGAAGCTGTAATGATGGGATTATTCGGGCTGCTTTGTTCTTCGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    424 TGGCTTGAAGCTGTAATGATGGGATTATTCGGGCTGCTTTGTTCTTCGCT    473

BSNT_00772___    501 GTTCCGCAACAGCGCGGTAGCAGTTGTTGTTTCTTTTGTCGTTTTATACG    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    474 GTTCCGCAATAGCGCGGTAGCAGTTGTTGTTTCTTTTGTCGTTTTATACG    523

BSNT_00772___    551 GAGCGAGTACACTTGTTCAGCTCATGAAGTTGTTTGAAAACAAGTGGGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    524 GAGCGAGTACACTTGTTCAGCTCATGAAGTTGTTTGAAAACAAGTGGGGC    573

BSNT_00772___    601 AGCTTTTTGCTTTTTGCGAACACAGACTTTACGCAATACGGAAGCGGAGA    650
                     |||||||||||||||||||||||.|||||||||||||||.||||||||||
BSU04500___yd    574 AGCTTTTTGCTTTTTGCGAACACTGACTTTACGCAATACAGAAGCGGAGA    623

BSNT_00772___    651 GACAGCGTTGTTTTCAGGCATGACGCCATTGTTCTCAATTGGAATTCTCA    700
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU04500___yd    624 GACAGCGTTGTTTTCAGGCATGACGCCATTGTTTTCAATTGGAATTCTCA    673

BSNT_00772___    701 TCATACATGCCATATTCTTCATCGTTGTTGGCTGGTGGTGCTTCTGTAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04500___yd    674 TCATACATGCCATATTCTTCATCGTTGTTGGCTGGTGGTGCTTCTGTAAA    723

BSNT_00772___    751 CGGGATGTTCGGGTCTAA    768
                     ||||||||||||||||||
BSU04500___yd    724 CGGGATGTTCGGGTCTAA    741


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00772 and BSU04500

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
