Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00768 and BSU04480

See Amino acid alignment / Visit BSNT_00768 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence dna-align/BSNT_00768___ydbI.1.22522.seq
#    -bsequence dna-align/BSU04480___ydbI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00768___ydbI-BSU04480___ydbI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00768___ydbI-BSU04480___ydbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00768___ydbI
# 2: BSU04480___ydbI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1053
# Identity:    1038/1053 (98.6%)
# Similarity:  1038/1053 (98.6%)
# Gaps:           0/1053 ( 0.0%)
# Score: 5130.0
# 
#
#=======================================

BSNT_00768___      1 ATGGCCGCTTTAGTTAAATTTTTTCAGCACCCGGGAGTAAGGCGTTTCTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd      1 ATGGCCGCTTTAGTTAAATTTTTTCAGCACCCGGGAGTAAGGCGTTTCTC     50

BSNT_00768___     51 CATCTTTGTCGTGTTAACTGGTGTGTTATATCTATTTAAGAGCATGATCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd     51 CATCTTTGTCGTGTTAACTGGTGTGTTATATCTATTTAAGAGCATGATCA    100

BSNT_00768___    101 ACTTAATATTGCTTACCTTTATTTTCACATTTCTAATGGATCGTTTGGAG    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU04480___yd    101 ACTTAATATTGCTTACCTTCATTTTCACATTTCTAATGGATCGTTTGGAG    150

BSNT_00768___    151 CTTGTCGTGCGGCAGTTTGTAAGCCGGTTCTTCCGCGTGAGCCAGCGGGT    200
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04480___yd    151 CTTGTCGTGCGGCAGTTTGTAAGCCAGTTCTTCCGCGTGAGCCAGCGGGT    200

BSNT_00768___    201 TGTCATTACGTTTCTTTACATTTTGCTGGCTGTGCTGCTTACAGTCGGGG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04480___yd    201 TGTCATTACGTTTCTTTACATGTTGCTGGCTGTGCTGCTTACAGTCGGGG    250

BSNT_00768___    251 GCTTTGTGTTTTATCCGGTCGTCGCGGCGCAGATCCAGCAGCTGGTTAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU04480___yd    251 GCTTTGTGTTTTATCCGGTCGTCGCGGCGCAGATCCAGCAGCTGGTAAAG    300

BSNT_00768___    301 CAGATTAAACATATTGCGTATCACCCTGACAGCATCCCTTTCTTTGATGA    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU04480___yd    301 CAGATTAAACATATTGCGTATCATCCTGACAGCATCCCTTTCTTTGATGA    350

BSNT_00768___    351 GATCACCAGTGTCTTCGGAGATATTAACATCAGTTCATATGTCAAAGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04480___yd    351 GATCACCAGTGTCTTCGGAGATATTAACATCAGTTCATATGTCAAAGAGG    400

BSNT_00768___    401 GCTTCAATGTAGTGTATACGTATCTGGCCGATATCAGCACATTCGGCTTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd    401 GCTTCAATGTAGTGTATACGTATCTGGCCGATATCAGCACATTCGGCTTG    450

BSNT_00768___    451 CAGGTCGTGATGGCGCTCATTCTCAGCATGTTTTTCTTATTTGAGAAAAA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU04480___yd    451 CAGGTCGTGATGGCGCTCATTCTTAGCATGTTTTTCTTATTTGAGAAAAA    500

BSNT_00768___    501 ACGGCTTTCTGAATTCATGGCGAAATTTAAAACGAGCAAACTGAGGGTCT    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04480___yd    501 ACGGCTTTCTGAATTCATGGCGAAATTTAAAACGAGCAAACTTAGGGTCT    550

BSNT_00768___    551 TTTATGAGGAAATTGCTTTTTTTGGAAGCAAATTTGCAAGAACGTTCGGC    600
                     ||||||||||.|||||||||||.|||||||||||||||||||||||||||
BSU04480___yd    551 TTTATGAGGAGATTGCTTTTTTCGGAAGCAAATTTGCAAGAACGTTCGGC    600

BSNT_00768___    601 AAGGTGCTCGAGGCTCAATTTATCATTGCGCTCGTCAACTGTATTCTGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd    601 AAGGTGCTCGAGGCTCAATTTATCATTGCGCTCGTCAACTGTATTCTGAC    650

BSNT_00768___    651 GTTTATCGCGCTTTGGATTATGCATTTTCCGCAGCTGTTTGGGCTTTCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd    651 GTTTATCGCGCTTTGGATTATGCATTTTCCGCAGCTGTTTGGGCTTTCGA    700

BSNT_00768___    701 TTATGGTGTTCTTCCTTGGGTTGATCCCTGTAGCAGGCGTCGTCATTTCC    750
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU04480___yd    701 TTATGGTGTTCTTCCTTGGATTGATCCCTGTAGCAGGCGTCGTCATTTCC    750

BSNT_00768___    751 CTGATTCCGCTCAGCATTATCGCCTACAGCACTGGCGGCGGAATGTATGT    800
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04480___yd    751 CTGATTCCGCTCAGCATTATCGCCTACAGCACTGGCGGTGGAATGTATGT    800

BSNT_00768___    801 GCTCTACATTGTCCTTGTCATATTCGCCATTCATGCGATCGAAACATATT    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04480___yd    801 GCTCTACATTGTCCTTGTCATATTCGCCATTCATGCGATCGAAACCTATT    850

BSNT_00768___    851 TCTTAAATCCGAAGCTGATGTCGGCGAAAACAGAGCTGCCAATCTTTTTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd    851 TCTTAAATCCGAAGCTGATGTCGGCGAAAACAGAGCTGCCAATCTTTTTC    900

BSNT_00768___    901 ACCTTCACTGTACTCATTTTCTCTGAACACTTTTTCGGCATTTGGGGTTT    950
                     ||||||||.|||||||||||||||||||||||.|||||||||||||||||
BSU04480___yd    901 ACCTTCACAGTACTCATTTTCTCTGAACACTTCTTCGGCATTTGGGGTTT    950

BSNT_00768___    951 AATTATCGGGATTCCGATCTTTGTGTTTCTCCTTGATATTCTGGATGTCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd    951 AATTATCGGGATTCCGATCTTTGTGTTTCTCCTTGATATTCTGGATGTCA   1000

BSNT_00768___   1001 CCAACAAGGAAGATAGGTCTAAAGGACCCCGAGAGAATAGCGATAAAAAG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04480___yd   1001 CCAACAAGGAAGATAGGTCTAAAGGACCCCGAGAGAATAGCGATAAAAAG   1050

BSNT_00768___   1051 TAG   1053
                     |||
BSU04480___yd   1051 TAG   1053


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