Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00750 and BSU04359

See Amino acid alignment / Visit BSNT_00750 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:07
# Commandline: needle
#    -asequence dna-align/BSNT_00750___ydaQ.1.22522.seq
#    -bsequence dna-align/BSU04359___ydzK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00750___ydaQ-BSU04359___ydzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00750___ydaQ-BSU04359___ydzK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00750___ydaQ
# 2: BSU04359___ydzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     263/270 (97.4%)
# Similarity:   263/270 (97.4%)
# Gaps:           3/270 ( 1.1%)
# Score: 1299.0
# 
#
#=======================================

BSNT_00750___      1 ATGATGTCAGTATTTATTCTGTTTTATTTGTGGATTGTTCCTATCGTTAT     50
                        |||||||||||||||||||||||||||||||||||||||||.|||||
BSU04359___yd      1 ---ATGTCAGTATTTATTCTGTTTTATTTGTGGATTGTTCCTATTGTTAT     47

BSNT_00750___     51 CGGCATTTTATGTTCTGTTGCTGCCCATAGATCCAAGGGAAAAATGAGAG    100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU04359___yd     48 CGGCATTTTATGTTCTGTTGCTGCCCATAAATCCAAGGGAAAAATGAGAG     97

BSNT_00750___    101 TCGCGCCCGGCATTGCCATGATCGTGCTCAGTATTATTTCCCTAATCACG    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU04359___yd     98 TCGCGCCCGGCATTGCCATGATCGTGCTCAGTATCATTTCCCTAATCACG    147

BSNT_00750___    151 GCGTTTACGGCCGGACACACAAATTTCCACGTGTTTATCGGCGGCATGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04359___yd    148 GCGTTTACGGCCGGACACACAAATTTCCACGTGTTTATCGGCGGCATGTT    197

BSNT_00750___    201 TTTATTCGGCACCTTCTTGGTCGGTTCTGCTTTTCCTTTCTTCTTCGGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04359___yd    198 TTTATTCGGCACCTTCTTGGTCGGTTCTGCTTTTCCTTTCTTCTTCGGGC    247

BSNT_00750___    251 TGAAGAAAAAAGAGAAATAA    270
                     |||||||||||||.||||||
BSU04359___yd    248 TGAAGAAAAAAGAAAAATAA    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.