Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00744 and BSU04340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:07
# Commandline: needle
# -asequence dna-align/BSNT_00744___ydaP.1.22522.seq
# -bsequence dna-align/BSU04340___ydaP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00744___ydaP-BSU04340___ydaP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00744___ydaP-BSU04340___ydaP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00744___ydaP
# 2: BSU04340___ydaP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1725
# Identity: 1692/1725 (98.1%)
# Similarity: 1692/1725 (98.1%)
# Gaps: 0/1725 ( 0.0%)
# Score: 8328.0
#
#
#=======================================
BSNT_00744___ 1 ATGGCACACAAAACTGCAGGACAAGCAATGACAGAGCTGCTTGAGCAATG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1 ATGGCACACAAAACTGCAGGACAAGCAATGACAGAGCTGCTTGAGCAATG 50
BSNT_00744___ 51 GGGAGTTGATCATGTATACGGCATCCCCGGAGACAGTATAAATGAGTTTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 51 GGGAGTTGATCATGTATACGGCATCCCCGGAGACAGTATAAATGAGTTTA 100
BSNT_00744___ 101 TCGAAGAATTAAGACACGAAAGAAATCAACTGAAGTTCATTCAAACCCGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 101 TCGAAGAATTAAGACACGAAAGAAATCAACTGAAGTTCATTCAAACCCGC 150
BSNT_00744___ 151 CACGAAGAGGTAGCGGCACTGGCAGCCGCGGCTGAAGCAAAACTCACCGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 151 CACGAAGAGGTAGCGGCACTGGCAGCCGCGGCTGAAGCAAAACTCACCGG 200
BSNT_00744___ 201 CAAGATCGGAGTCTGTCTGTCAATCGCAGGGCCGGGAGCGGTGCACTTAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 201 CAAGATCGGAGTCTGTCTGTCAATCGCAGGGCCGGGAGCGGTGCACTTAT 250
BSNT_00744___ 251 TAAATGGTTTATATGATGCTAAAGCCGACGGCGCCCCTGTGCTGGCGATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 251 TAAATGGTTTATATGATGCTAAAGCCGACGGCGCCCCTGTGCTGGCGATT 300
BSNT_00744___ 301 GCAGGACAGGTTTCTTCTGGCGAAGTCGGACGGGACTATTTCCAGGAGAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 301 GCAGGACAGGTTTCTTCTGGCGAAGTCGGACGGGACTATTTCCAGGAGAT 350
BSNT_00744___ 351 TAAGCTGGAGCAAATGTTTGAGGACGTGGCCGTGTTCAACAGAGAGGTAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 351 TAAGCTGGAGCAAATGTTTGAGGACGTGGCCGTGTTCAACAGAGAGGTAC 400
BSNT_00744___ 401 ATAGCGCGGAATCACTTCCGGATCTCTTAAATCAGGCGATCAGGACCGCC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 401 ATAGCGCGGAATCACTTCCGGATCTCTTAAATCAGGCGATCAGGACCGCC 450
BSNT_00744___ 451 TACAGCAAAAAAGGCGTTGCGGTATTGAGCGTGTCAGATGATTTGTTTGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 451 TACAGCAAAAAAGGCGTTGCGGTATTGAGCGTGTCAGATGATTTGTTTGC 500
BSNT_00744___ 501 GGAGAAAATCAAACGGGAGCCCGTGTATACTTCACCGGTGTATATTGAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 501 GGAGAAAATCAAACGGGAGCCCGTGTATACTTCACCGGTGTATATTGAAG 550
BSNT_00744___ 551 GGAACCTTGAACCGAAAAAAGAACAGCTCGTCACCTGCGCCCAATATATT 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 551 GGAACCTAGAACCGAAAAAAGAACAGCTCGTCACCTGCGCCCAATATATT 600
BSNT_00744___ 601 AATAACGCTAAGAAACCGATTATCCTGGCAGGGCAGGGAATGAAAAAGGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 601 AATAACGCTAAGAAACCGATTATCCTGGCAGGGCAGGGAATGAAAAAGGC 650
BSNT_00744___ 651 GAAACGGGAGCTCTTAGAATTTGCGGACAAAGCCGCCGCTCCGATCGTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 651 GAAACGGGAGCTCTTAGAATTTGCGGACAAAGCCGCCGCTCCGATCGTTG 700
BSNT_00744___ 701 TTACACTCCCGGCAAAAGGTGTCGTTCCCGATAAGCACCCGCATTTTCTC 750
||||||||||||||||.|||||.|||||||||||||||||.|||||||||
BSU04340___yd 701 TTACACTCCCGGCAAAGGGTGTTGTTCCCGATAAGCACCCACATTTTCTC 750
BSNT_00744___ 751 GGCAACCTCGGGCAGATCGGAACAAAGCCGGCTTACGAGGCAATGGAGGA 800
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04340___yd 751 GGCAACCTCGGTCAGATCGGAACAAAGCCGGCTTACGAGGCAATGGAGGA 800
BSNT_00744___ 801 ATGTGATTTATTAATCATGCTCGGAACATCATTCCCGTACCGTGATTATT 850
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04340___yd 801 ATGTGATTTATTAATCATGCTCGGAACGTCATTCCCGTACCGTGATTATT 850
BSNT_00744___ 851 TGCCTGATGACACGCCGGCAATCCAGCTCGATTCAGACCCGGCAAAAATC 900
|||||||||||||||||||.||.|||||||||||||||||||||||||||
BSU04340___yd 851 TGCCTGATGACACGCCGGCGATACAGCTCGATTCAGACCCGGCAAAAATC 900
BSNT_00744___ 901 GGAAAACGGTATCCGGTGACAGCGGGCCTTGTCTGCGATTCGGCTCTCGG 950
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU04340___yd 901 GGAAAACGGTATCCGGTGACAGCGGGCCTTGTCTGTGATTCGGCTCTCGG 950
BSNT_00744___ 951 TCTGCGCGAATTGACAGAGTATATTGAACGCAAGGAAGACAGAAGATTCC 1000
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 951 TTTGCGCGAATTGACAGAGTATATTGAACGCAAGGAAGACAGAAGATTCC 1000
BSNT_00744___ 1001 TGAATGCCTGCACAGAACATATGCAGCATTGGTGGAACGAAATTGAAAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1001 TGAATGCCTGCACAGAACATATGCAGCATTGGTGGAACGAAATTGAAAAA 1050
BSNT_00744___ 1051 GATGAGACAGAGGCAACAACACCGCTTAAACCTCAGCAGGTCGTGGCCCG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1051 GATGAGACAGAGGCAACAACACCGCTTAAACCTCAGCAGGTCGTGGCCCG 1100
BSNT_00744___ 1101 TCTTCAGGAAGCGGCAGCCGATGATGCGGTGCTCTCTGTCGATGTCGGCA 1150
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU04340___yd 1101 TCTTCAGGAAGCGGCAGCCGATGATGCGGTGCTCTCTGTAGATGTCGGCA 1150
BSNT_00744___ 1151 CTGTGACAGTCTGGATGGCGCGTCATTTCAAAATGAACGCGAACCAGGAT 1200
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU04340___yd 1151 CTGTGACAGTCTGGATGGCGCGTCATTTCAAAATGAACGCGAATCAGGAT 1200
BSNT_00744___ 1201 TTCATCGTCTCCAGCTGGCTTGCGACAATGGGCTGCGGCCTGCCGGGAGC 1250
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1201 TTCATCGTTTCCAGCTGGCTTGCGACAATGGGCTGCGGCCTGCCGGGAGC 1250
BSNT_00744___ 1251 GATCGCCGCAAGCTTGTCCGAACCGGAACGCCAGGCGATCGCTGTCTGTG 1300
|||.||.||.||||||||||||||||||||||||||||||||.|||||.|
BSU04340___yd 1251 GATTGCAGCGAGCTTGTCCGAACCGGAACGCCAGGCGATCGCCGTCTGCG 1300
BSNT_00744___ 1301 GTGACGGGGGATTTTCCATGGTCATGCAGGATCTTCCGACCGCTGTCAAA 1350
|||||||||||||||||||||||||||||||.|||||||||||.||.|||
BSU04340___yd 1301 GTGACGGGGGATTTTCCATGGTCATGCAGGACCTTCCGACCGCCGTTAAA 1350
BSNT_00744___ 1351 TATAAGCTCCCGATCACAGTCGTCATTTTAAACAACGAAAATCTTGGTAT 1400
|||||||||||||||||||||||.||||||||||||||||||||.||.||
BSU04340___yd 1351 TATAAGCTCCCGATCACAGTCGTTATTTTAAACAACGAAAATCTCGGCAT 1400
BSNT_00744___ 1401 GATTGAGTACGAGCAGCAGGTCAAAGGCAATATCGACTATGTCACAAAAC 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1401 GATTGAGTACGAGCAGCAGGTCAAAGGCAATATCGACTATGTCACAAAAC 1450
BSNT_00744___ 1451 TTCAAAATGTCGACTATGCCGCATTTGCAGAAAGCTGCGGAGCAAAGGGC 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd 1451 TTCAAAATGTCGACTATGCCGCATTTGCAGAAAGCTGCGGAGCAAAGGGC 1500
BSNT_00744___ 1501 ATCAAAGTGACTAAAGCGGAAGAGCTTGCGCCGGCATTCCATGAGGCGCT 1550
|||||||||||.|||||||||||||||||||||||.||.|||||||||||
BSU04340___yd 1501 ATCAAAGTGACCAAAGCGGAAGAGCTTGCGCCGGCTTTTCATGAGGCGCT 1550
BSNT_00744___ 1551 GCACTCTGACCAACCGGTCGTTGTGGATGTCATGATTGGAAACGAACCGC 1600
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04340___yd 1551 GCACTCTGACCAACCGGTCGTAGTGGATGTCATGATTGGAAACGAACCGC 1600
BSNT_00744___ 1601 CGCTTCCTGGCAAAATCACATACGGGCAGGCGAAAGGTTTTAGCAAATAC 1650
|||||||||||||||||||.|||||||||||||||||.||||||||.|||
BSU04340___yd 1601 CGCTTCCTGGCAAAATCACCTACGGGCAGGCGAAAGGCTTTAGCAAGTAC 1650
BSNT_00744___ 1651 ATGCTGAAAAACTTCTTCGAAAACCAAAAAATTGAAATGCCGTCACTGAA 1700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04340___yd 1651 ATGCTGAAAAACTTCTTCGAAAACCAAAAATTTGAAATGCCGTCACTGAA 1700
BSNT_00744___ 1701 GAAAAGTTTGAAACGGTTATTTTAG 1725
||||||||||||||||||||||||.
BSU04340___yd 1701 GAAAAGTTTGAAACGGTTATTTTAA 1725
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