Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00741 and BSU04260

See Amino acid alignment / Visit BSNT_00741 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:07
# Commandline: needle
#    -asequence dna-align/BSNT_00741___topB.1.22522.seq
#    -bsequence dna-align/BSU04260___topB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00741___topB-BSU04260___topB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00741___topB-BSU04260___topB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: BSU04260___topB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2184
# Identity:    2159/2184 (98.9%)
# Similarity:  2159/2184 (98.9%)
# Gaps:           0/2184 ( 0.0%)
# Score: 10695.0
# 
#
#=======================================

BSNT_00741___      1 ATGTCAAAAACAGTTGTATTAGCTGAAAAACCTTCAGTCGGCAGGGATTT     50
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04260___to      1 ATGTCAAAAACAGTTGTATTAGCTGAAAAACCTTCAGTCGGCCGGGATTT     50

BSNT_00741___     51 AGCCCGGGTGCTGAAGTGCCATAAAAAAGGAAACGGTTATCTCGAAGGCG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04260___to     51 AGCCCGGGTACTGAAGTGCCATAAAAAAGGAAACGGTTATCTCGAAGGCG    100

BSNT_00741___    101 ATCAATATATTGTGACCTGGGCTTTAGGCCATTTGGTGACGCTTGCTGAT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU04260___to    101 ATCAATATATTGTGACTTGGGCTTTAGGCCATTTGGTGACGCTTGCTGAT    150

BSNT_00741___    151 CCGGAAGGCTACGGAAAAGAATTTCAATCATGGCGCCTAGAGGATCTGCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    151 CCGGAAGGCTACGGAAAAGAATTTCAATCATGGCGCCTAGAGGATCTGCC    200

BSNT_00741___    201 GATTATCCCAGAACCCTTGAAGCTTGTGGTGATAAAAAAAACCGGAAAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    201 GATTATCCCAGAACCCTTGAAGCTTGTGGTGATAAAAAAAACCGGAAAGC    250

BSNT_00741___    251 AGTTCAATGCAGTCAAATCCCAGCTTACCCGTAAAGACGTCAATCAGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    251 AGTTCAATGCAGTCAAATCCCAGCTTACCCGTAAAGACGTCAATCAGATT    300

BSNT_00741___    301 GTCATCGCGACTGACGCAGGCCGGGAAGGTGAGCTTGTTGCGCGCTGGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    301 GTCATCGCGACTGACGCAGGCCGGGAAGGTGAGCTTGTTGCGCGCTGGAT    350

BSNT_00741___    351 CATTGAGAAAGCGAATGTCCGAAAACCAATCAAGCGGCTGTGGATTTCAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    351 CATTGAGAAAGCGAATGTCCGAAAACCAATCAAGCGGCTGTGGATTTCAT    400

BSNT_00741___    401 CTGTGACGGATAAAGCGATCAAGGAAGGTTTTCAAAAGCTGCGCAGCGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    401 CTGTGACGGATAAAGCGATCAAGGAAGGTTTTCAAAAGCTGCGCAGCGGC    450

BSNT_00741___    451 AAAGAATATGAAAACCTTTACCATTCTGCCGTCGCCAGAGCGGAAGCGGA    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04260___to    451 AAAGAATATGAAAACCTGTACCATTCTGCCGTCGCCAGAGCGGAAGCGGA    500

BSNT_00741___    501 TTGGATTGTGGGGATCAATGCCACCCGTGCACTTACCACAAAATTCAATG    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU04260___to    501 TTGGATTGTGGGGATCAACGCCACCCGTGCACTTACCACAAAATTCAATG    550

BSNT_00741___    551 CCCAGCTCTCATGCGGGCGTGTGCAGACTCCGACGCTTGCCATGATTGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    551 CCCAGCTCTCATGCGGGCGTGTGCAGACTCCGACGCTTGCCATGATTGCA    600

BSNT_00741___    601 AAGCGCGAGGCAGACATTCAAGCGTTTACGCCCGTTCCGTATTACGGCAT    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04260___to    601 AAGCGCGAGGCAGACATTCAGGCGTTTACGCCCGTTCCGTATTACGGCAT    650

BSNT_00741___    651 CCGTGCTGTAGTCGACGGCATGACGCTGACGTGGCAGGATAAGAAATCAA    700
                     .|||||||.|||||||||||||||||||||||||||||||||||||||||
BSU04260___to    651 ACGTGCTGCAGTCGACGGCATGACGCTGACGTGGCAGGATAAGAAATCAA    700

BSNT_00741___    701 AGCAGACGAGAACGTTCAATCAAGATGTAACAAGCCGTCTGCTAAAAAAT    750
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04260___to    701 AGCAGACGAGAACGTTCAATCAAGATGTAACAAGCCGTTTGCTAAAAAAT    750

BSNT_00741___    751 CTCCAAGGAAAGCAAGCGGTCGTAGCTGAGCTGAAAAAAACAGCGAAAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    751 CTCCAAGGAAAGCAAGCGGTCGTAGCTGAGCTGAAAAAAACAGCGAAAAA    800

BSNT_00741___    801 AAGCTTTGCGCCTGCGCTTTATGATTTAACGGAGCTGCAGCGTGACGCCC    850
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU04260___to    801 AAGCTTTGCGCCTGCGCTTTATGATTTAACGGAGCTCCAGCGTGACGCCC    850

BSNT_00741___    851 ACAAGCGCTTCGGTTTTTCTGCTAAAGAAACGCTTTCTGTCCTGCAGAAG    900
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU04260___to    851 ACAAGCGCTTCGGTTTTTCTGCCAAAGAAACGCTTTCTGTCCTGCAGAAG    900

BSNT_00741___    901 CTATATGAGCAGCATAAGCTCGTCACATATCCGCGGACGGACTCTAGATT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to    901 CTATATGAGCAGCATAAGCTCGTCACATATCCGCGGACGGACTCTAGATT    950

BSNT_00741___    951 TTTATCCAGTGACATCATCCCAACGTTAAAAGACCGTCTGGAAGGCATGG   1000
                     ||||||||||||||||.||||.||||||||||||||||||||||||||||
BSU04260___to    951 TTTATCCAGTGACATCGTCCCGACGTTAAAAGACCGTCTGGAAGGCATGG   1000

BSNT_00741___   1001 AAGTAAAACCGTATGCCCAATATGTCAGCCAAATTAAAAAACGCGGCATT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1001 AAGTAAAACCGTATGCCCAATATGTCAGCCAAATTAAAAAACGCGGCATT   1050

BSNT_00741___   1051 AAATCTCATAAAGGATATGTCAATGACGCGAAGGTGTCAGACCACCACGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1051 AAATCTCATAAAGGATATGTCAATGACGCGAAGGTGTCAGACCACCACGC   1100

BSNT_00741___   1101 GATTATCCCGACCGAAGAGCCGCTCGTTCTCAGCAGTCTGAGTGATAAAG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1101 GATTATCCCGACCGAAGAGCCGCTCGTTCTCAGCAGTCTGAGTGATAAAG   1150

BSNT_00741___   1151 AACGAAAGCTGTATGACCTGATTGCGAAACGTTTCCTTGCTGTATTAATG   1200
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU04260___to   1151 AACGAAAGCTGTATGACCTGATTGCGAAACGTTTCCTGGCTGTATTAATG   1200

BSNT_00741___   1201 CCTGCATTCGAATATGAGGAAACAAAGGTCATCGCAGAAATCGGCGGAGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1201 CCTGCATTCGAATATGAGGAAACAAAGGTCATCGCAGAAATCGGCGGAGA   1250

BSNT_00741___   1251 AACCTTTAGGGCGAAAGGCAAAACCGTGCAATCGCAAGGGTGGAAAGCCG   1300
                     ||||||||.|||||||||||||||||||||.|||||||||||||||||||
BSU04260___to   1251 AACCTTTACGGCGAAAGGCAAAACCGTGCAGTCGCAAGGGTGGAAAGCCG   1300

BSNT_00741___   1301 TTTATGATATGGCGGATGAGGATGATGAGCAGGAGGATGACAGAGACCAG   1350
                     ||||||||||||||||.|||||||||||||||||||||||||||||.|||
BSU04260___to   1301 TTTATGATATGGCGGAAGAGGATGATGAGCAGGAGGATGACAGAGATCAG   1350

BSNT_00741___   1351 ACACTTCCTGCGCTTCAAAAAGGCGACACACTTGCCGTCCGCACGTTAAC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1351 ACACTTCCTGCGCTTCAAAAAGGCGACACACTTGCCGTCCGCACGTTAAC   1400

BSNT_00741___   1401 GGAAACAAGCGGCCAAACGAAGCCGCCTGCCCGCTTTAATGAAGGGACCT   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1401 GGAAACAAGCGGCCAAACGAAGCCGCCTGCCCGCTTTAATGAAGGGACCT   1450

BSNT_00741___   1451 TGCTATCAGCGATGGAAAACCCAAGCGCGTTTATGCAGGGAGAAGAAAAA   1500
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1451 TGCTGTCAGCGATGGAAAACCCAAGCGCGTTTATGCAGGGAGAAGAAAAA   1500

BSNT_00741___   1501 GGCCTCGTCAAAACGCTTGGAGAAACAGGCGGCCTCGGCACGGTGGCAAC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1501 GGCCTCGTCAAAACGCTTGGAGAAACAGGCGGCCTCGGCACGGTGGCAAC   1550

BSNT_00741___   1551 GCGTGCCGACATTATTGAAAAACTGTTCAACAGCTTTTTAATCGAGAAAA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1551 GCGTGCCGACATTATTGAAAAACTGTTCAACAGCTTTTTAATCGAGAAAA   1600

BSNT_00741___   1601 AAGGCCAAGATATTTTTATCACATCTAAAGGAAAACAGCTCCTGCAGCTT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1601 AAGGCCAAGATATTTTTATCACATCTAAAGGAAAACAGCTCCTGCAGCTT   1650

BSNT_00741___   1651 GTTCCGGAGGATCTGAAATCACCGGCCTTAACAGCAGAATGGGAGCAAAA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1651 GTTCCGGAGGATCTGAAATCACCGGCCTTAACAGCAGAATGGGAGCAAAA   1700

BSNT_00741___   1701 GCTGTCTGCAATCGCTGCCGGCAAATTGAAATCGGCTGTTTTTATTAAAG   1750
                     |||||||||.|||||.||||||||||||||||||||||||||||||||||
BSU04260___to   1701 GCTGTCTGCGATCGCGGCCGGCAAATTGAAATCGGCTGTTTTTATTAAAG   1750

BSNT_00741___   1751 ATATGAAGGCTTACGCTCACCAAACGGTAAAAGAAATCAAAAACAGCAGC   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1751 ATATGAAGGCTTACGCTCACCAAACGGTAAAAGAAATCAAAAACAGCAGC   1800

BSNT_00741___   1801 CAAACCTTCCGACATGACAACATTACGGGAACGGCATGTCCGGAATGCGG   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1801 CAAACCTTCCGACATGACAACATTACGGGAACGGCATGTCCGGAATGCGG   1850

BSNT_00741___   1851 CAAAATGATGCTGAAAGTAAACGGCAAACGCGGTACGATGCTCGTGTGCC   1900
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU04260___to   1851 CAAAATGATGCTGAAAGTAAACGGCAAACGCGGGACGATGCTCGTGTGCC   1900

BSNT_00741___   1901 AAGATCGTGAATGCGGAAGCAGAAAAACGATTGCCCGAAAAACAAACGCA   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   1901 AAGATCGTGAATGCGGAAGCAGAAAAACGATTGCCCGAAAAACAAACGCA   1950

BSNT_00741___   1951 CGCTGCCCGAACTGCCATAAACGAATGGAGCTTCGCGGCCAAGGCGAGGG   2000
                     ||||||||.||.|||||||||.||||||||||||||||||||||||||||
BSU04260___to   1951 CGCTGCCCAAATTGCCATAAAAGAATGGAGCTTCGCGGCCAAGGCGAGGG   2000

BSNT_00741___   2001 CCAAACCTTTGCGTGTGTGTGCGGTCACCGTGAAAAGCTCTCTGTATTTG   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   2001 CCAAACCTTTGCGTGTGTGTGCGGTCACCGTGAAAAGCTCTCTGTATTTG   2050

BSNT_00741___   2051 AAAAACGAAAAAACAAAGACAAAGCGCGTGCTACCAAACGGGACGTATCC   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   2051 AAAAACGAAAAAACAAAGACAAAGCGCGTGCTACCAAACGGGACGTATCC   2100

BSNT_00741___   2101 TCTTATATGAAAAAACAAAATAAAGATGAGCCGATTAACAACGCGCTGGC   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04260___to   2101 TCTTATATGAAAAAACAAAATAAAGATGAGCCGATTAACAACGCGCTGGC   2150

BSNT_00741___   2151 AGAACAGCTGAAAAAACTCGGTTTGGATAAATAA   2184
                     ||||||||||||||||||||||||||||||||||
BSU04260___to   2151 AGAACAGCTGAAAAAACTCGGTTTGGATAAATAA   2184


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