Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00739 and BSU04240

See Amino acid alignment / Visit BSNT_00739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence dna-align/BSNT_00739___ydzA.1.22522.seq
#    -bsequence dna-align/BSU04240___ydzA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00739___ydzA-BSU04240___ydzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00739___ydzA-BSU04240___ydzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00739___ydzA
# 2: BSU04240___ydzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     287/291 (98.6%)
# Similarity:   287/291 (98.6%)
# Gaps:           0/291 ( 0.0%)
# Score: 1419.0
# 
#
#=======================================

BSNT_00739___      1 ATGCTGCAAACGCCGATCGGAAGACTTCGCACGATGGGTTTTATTGAAGG     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU04240___yd      1 ATGCTGCACACGCCGATCGGAAGACTTCGCACGATGGGTTTTATTGAAGG     50

BSNT_00739___     51 AATGTCACTCTTAATCCTGTTGTTCATCGCTATGCCGCTTAAATATTGGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04240___yd     51 AATGTCACTCTTAATCCTGTTGTTCATCGCTATGCCGCTTAAATATTGGG    100

BSNT_00739___    101 CAGGCCTTCCGCTTGCGGTGACAATTGTCGGTTCGGTTCACGGCGGGTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04240___yd    101 CAGGCCTTCCGCTTGCGGTGACAATTGTCGGTTCGGTTCACGGCGGGTTG    150

BSNT_00739___    151 TTCATTTTGTATTTACTTGTCTTGGCTTATGCAACCTTCTCTGTCAAATG    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU04240___yd    151 TTCATTTTGTATTTGCTTGTCTTGGCTTATGCAACCTTCTCTGTCAAATG    200

BSNT_00739___    201 GCCGCTGAAATGGTCAGCTGCCGGCTTCGTCGCCGCTTTCGTCCCATTCG    250
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04240___yd    201 GCCGCTGAAATGGTCAGCTGCCGGCTTCATCGCCGCTTTCGTCCCATTCG    250

BSNT_00739___    251 GAAATTTTTTGTACGACCGCGGATTAAGGAAATATAAATAA    291
                     |||||||||||||||||||||||||||||||.|||||||||
BSU04240___yd    251 GAAATTTTTTGTACGACCGCGGATTAAGGAACTATAAATAA    291


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.