Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00735 and BSU04200

See Amino acid alignment / Visit BSNT_00735 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence dna-align/BSNT_00735___ydaE.1.22522.seq
#    -bsequence dna-align/BSU04200___ydaE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00735___ydaE-BSU04200___ydaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00735___ydaE-BSU04200___ydaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00735___ydaE
# 2: BSU04200___ydaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     497/504 (98.6%)
# Similarity:   497/504 (98.6%)
# Gaps:           0/504 ( 0.0%)
# Score: 2457.0
# 
#
#=======================================

BSNT_00735___      1 ATGGGCATCACGAAAGAAGAAGTGAACAGCTACTATCAAAAAGCAGGGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd      1 ATGGGCATCACGAAAGAAGAAGTGAACAGCTACTATCAAAAAGCAGGGAT     50

BSNT_00735___     51 TGTATTAACGGACGAGGAAGTAGACCAAATCCAGCTGATGGATTACGGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd     51 TGTATTAACGGACGAGGAAGTAGACCAAATCCAGCTGATGGATTACGGCT    100

BSNT_00735___    101 TAGGAAAAGAAAGAAAAGTCGGGCTCCAGCTCTTCGTCTACGTCAATACA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    101 TAGGAAAAGAAAGAAAAGTCGGGCTCCAGCTCTTCGTCTACGTCAATACA    150

BSNT_00735___    151 GACCGTTATTGTTCAAAGGAATTGGTGCTGTTTCCGGGACAGACTTGCCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    151 GACCGTTATTGTTCAAAGGAATTGGTGCTGTTTCCGGGACAGACTTGCCC    200

BSNT_00735___    201 GGAACACCGCCATCCGCCGGTCGACGGCCAGGAAGGCAAGCAGGAGACCT    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04200___yd    201 GGAACACCGCCATCCACCGGTCGACGGCCAGGAAGGCAAGCAGGAGACCT    250

BSNT_00735___    251 TCCGCTGCCGCTACGGAAAAGTGTATCTTTACGTAGAAGGAGAAAAAACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    251 TCCGCTGCCGCTACGGAAAAGTGTATCTTTACGTAGAAGGAGAAAAAACG    300

BSNT_00735___    301 CCGCTTCCAAAAGTTCTCCCTCCTCAGGAAGACAGAGAACACTATACGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    301 CCGCTTCCAAAAGTTCTCCCTCCTCAGGAAGACAGAGAACACTATACGGT    350

BSNT_00735___    351 CTGGCACGAAATTGAGCTAGAACCGGGCGGGCAATATACAATCCCCCCGA    400
                     ||||||||||||||||||||||||||||||||||||.||.||.||.||.|
BSU04200___yd    351 CTGGCACGAAATTGAGCTAGAACCGGGCGGGCAATACACGATTCCACCAA    400

BSNT_00735___    401 ATACAAAGCATTGGTTCCAGGCCGGGGAAGAAGGTGCCGTCGTGACGGAA    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    401 ACACAAAGCATTGGTTCCAGGCCGGGGAAGAAGGTGCCGTCGTGACGGAA    450

BSNT_00735___    451 ATGTCATCGACGAGCACGGATAAACATGATATCTTTACCGATCCAAGAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04200___yd    451 ATGTCATCGACGAGCACGGATAAACATGATATCTTTACCGATCCAAGAAT    500

BSNT_00735___    501 ATAA    504
                     ||||
BSU04200___yd    501 ATAA    504


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.