Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00728 and BSU04160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:05
# Commandline: needle
# -asequence dna-align/BSNT_00728___mtlR.1.22522.seq
# -bsequence dna-align/BSU04160___mtlR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00728___mtlR-BSU04160___mtlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00728___mtlR-BSU04160___mtlR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00728___mtlR
# 2: BSU04160___mtlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2085
# Identity: 2061/2085 (98.8%)
# Similarity: 2061/2085 (98.8%)
# Gaps: 0/2085 ( 0.0%)
# Score: 10209.0
#
#
#=======================================
BSNT_00728___ 1 ATGTATATGACTGCCAGAGAACAAAAGCTGTTAAAGCACTTATTATTACA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1 ATGTATATGACTGCCAGAGAACAAAAGCTGTTAAAGCACTTATTATTACA 50
BSNT_00728___ 51 AAACAGATATATAACCGTAACTGAGCTTGCTGAGCTGATGCAAGTCAGCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 51 AAACAGATATATAACCGTAACTGAGCTTGCTGAGCTGATGCAAGTCAGCA 100
BSNT_00728___ 101 CGAGAACCATTCACAGGGAACTCAAATCAATTAAACCGCTGATGGAAACC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 101 CGAGAACCATTCACAGGGAACTCAAATCAATTAAACCGCTGATGGAAACC 150
BSNT_00728___ 151 GTGGGGCTTACGTTAGATAAACAGCCCGGTAAAGGGTTGAAAGCAGTGGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 151 GTGGGGCTTACGTTAGATAAACAGCCCGGTAAAGGGTTGAAAGCAGTGGG 200
BSNT_00728___ 201 AAGTCCCGAGGATAAACAAAAGCTGCTTACTGATTTATCATATGAACAGC 250
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04160___mt 201 AAGTCCCGAGGGTAAACAAAAGCTGCTTACTGATTTATCATATGAACAGC 250
BSNT_00728___ 251 ATGAATACAGCGCCGACGAACGGAAACTGCTCATTCTTTGTTCGTTATTA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 251 ATGAATACAGCGCCGACGAACGGAAACTGCTCATTCTTTGTTCGTTATTA 300
BSNT_00728___ 301 GAGTCTCAGGAGCCCGTCAAACTGTACACGCTTGCTCATGATCTCCAGGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 301 GAGTCTCAGGAGCCCGTCAAACTGTACACGCTTGCTCATGATCTCCAGGT 350
BSNT_00728___ 351 GACGAATGCCACGGTCAGCTATGACTTAGATGAGCTCGAGAAGTGGATTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 351 GACGAATGCCACGGTCAGCTATGACTTAGATGAGCTCGAGAAGTGGATTT 400
BSNT_00728___ 401 CTCCCTTCGGACTGACACTGATCCGCAAAAGAGGTTTTGGCATCCAGCTC 450
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 401 CTCCCTTTGGACTGACACTGATCCGCAAAAGAGGTTTTGGCATCCAGCTC 450
BSNT_00728___ 451 ATAGGGCCGGAGAATGCGAAACGGAAAATTGTCGGCAACTTGATTGTGAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 451 ATAGGGCCGGAGAATGCGAAACGGAAAATTGTCGGCAACTTGATTGTGAA 500
BSNT_00728___ 501 CCGTCTCGACATCCAAATGTTTTTGGAAGCGGTTGAATTAAACATCAAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 501 CCGTCTCGACATCCAAATGTTTTTGGAAGCGGTTGAATTAAACATCAAAG 550
BSNT_00728___ 551 GAAAAACCGATTCTTCAGAGAAAATGTTCGGGGTTGTCAGCAAAGGTGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 551 GAAAAACCGATTCTTCAGAGAAAATGTTCGGGGTTGTCAGCAAAGGTGAG 600
BSNT_00728___ 601 CTGCTAAAAATGGAGCGCATCTTATTTCAGCTCAAAGAAAAAATCGCTTT 650
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 601 CTGTTAAAAATGGAGCGCATCTTATTTCAGCTCAAAGAAAAAATCGCTTT 650
BSNT_00728___ 651 TTCATTGTCCGACAGCTCCTATATAGCGCTCGTCGTCCATCTGACGTATG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 651 TTCATTGTCCGACAGCTCCTATATAGCGCTCGTCGTCCATCTGACGTATG 700
BSNT_00728___ 701 CGATCGAACGAATTAAGCTTGGGGAAACCATCACCATGGAGCAAAATGAG 750
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04160___mt 701 CGATCGAACGAATTAAGCTTGGGGAAACTATCACCATGGAGCAAAATGAG 750
BSNT_00728___ 751 CTTGAGGAACTGAAGAATGCGAAGGAATCCAGCTCGGCTCTTGAAATCGC 800
|||||||||||||.||||||||||||||.||||||.||||||||||||||
BSU04160___mt 751 CTTGAGGAACTGATGAATGCGAAGGAATACAGCTCCGCTCTTGAAATCGC 800
BSNT_00728___ 801 GGGCGAGCTTGAACGTGCCTTCGGCGTGACGATTCCAGAGGCGGAGGTCG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 801 GGGCGAGCTTGAACGTGCCTTCGGCGTGACGATTCCAGAGGCGGAGGTCG 850
BSNT_00728___ 851 GCTATATTACAATCCATCTTCGAAGCGCCAATCGAAAATACAAAACAGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 851 GCTATATTACAATCCATCTTCGAAGCGCCAATCGAAAATACAAAACAGAA 900
BSNT_00728___ 901 TACAAAGCGCAGGAAATTGAGCTGGAAACAGCCCTGCAAACAAAGCGGCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 901 TACAAAGCGCAGGAAATTGAGCTGGAAACAGCCCTGCAAACAAAGCGGCT 950
BSNT_00728___ 951 CATTGCTTTTATTTCAGACAAAATCAGAATGGATCTGACGAAAAACTACT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 951 CATTGCTTTTATTTCAGACAAAATCAGAATGGATCTGACGAAAAACTACT 1000
BSNT_00728___ 1001 CTTTATATGAAGGCTTGATTGCCCATTTGGAGCCGGCCGTCAGCCGCATA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1001 CTTTATATGAAGGCTTGATTGCCCATTTGGAGCCGGCCGTCAGCCGCATA 1050
BSNT_00728___ 1051 AAAGAAAATATTGAGATATACAATCCGATGAAGGAACAAATCAAGCGCGA 1100
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04160___mt 1051 AAAGAAAATATTGAGATATACAATCCGATGAAGGAACAGATCAAGCGCGA 1100
BSNT_00728___ 1101 TTATTTTCTGCTTTATATGGCGATCGAAGAAGGCGTCGAAAAGTATTTTC 1150
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU04160___mt 1101 TTATTTTCTGCTTTATATGGCGATCGAAGAAGGTGTCGAAAAGTATTTTC 1150
BSNT_00728___ 1151 CGGGCATGTCCTTTACTGATGATGAAATCGCTTTTATCGTTCTTCACTTT 1200
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU04160___mt 1151 CGGGCATGTCCTTTTCTGATGATGAAATCGCTTTTATCGTTCTTCACTTT 1200
BSNT_00728___ 1201 GGCTCGGCTCTTGAAATCAAAAAAGAAGAAGCAAAAGTGAAAGCGCTTGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1201 GGCTCGGCTCTTGAAATCAAAAAAGAAGAAGCAAAAGTGAAAGCGCTTGT 1250
BSNT_00728___ 1251 CGTCTGCTCAAGCGGGATCGGCTCCTCGAAAATGCTTGCCTCCAGACTGA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1251 CGTCTGCTCAAGCGGGATCGGCTCCTCGAAAATGCTTGCCTCCAGACTGA 1300
BSNT_00728___ 1301 AAAAAGAAATGCCGGAAATTGAATCGTTTGATATGTCATCCCTGATCGAG 1350
|||||||..|||||||||||||||||||||||||||||||.|||||||||
BSU04160___mt 1301 AAAAAGAGCTGCCGGAAATTGAATCGTTTGATATGTCATCTCTGATCGAG 1350
BSNT_00728___ 1351 CTAAAGGGGAAGGATGTTCAAGCCTATGATATGATTGTGTCCACTGTACC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1351 CTAAAGGGGAAGGATGTTCAAGCCTATGATATGATTGTGTCCACTGTACC 1400
BSNT_00728___ 1401 GATTCCTTATGAAAACATTGATTACATCATGGTCAGCCCGCTATTAAATG 1450
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU04160___mt 1401 GATTCCTTATGAAAACATTGATTACATCATGGTCAGCCCACTATTAAATG 1450
BSNT_00728___ 1451 AGGAAGACGCAAACCAGGTCAAGCAGTATATCAAGCGGAAGATTCCCCTT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1451 AGGAAGACGCAAACCAGGTCAAGCAGTATATCAAGCGGAAGATTCCCCTT 1500
BSNT_00728___ 1501 ATTCTTAACAAAAAAAGAAGCACGAAGGAAGAGGCGCAGCAAGCTGATGT 1550
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04160___mt 1501 ATTCTTAACAAAAAAAGAAGCTCGAAGGAAGAGGCGCAGCAAGCTGATGT 1550
BSNT_00728___ 1551 ACCTGACATGCTAGAGGCGGCGGAAAGCATAGGGCGGTATATGGAGGTTA 1600
||||||||||||.||||||||||||||||||||||||||||||||.||||
BSU04160___mt 1551 ACCTGACATGCTGGAGGCGGCGGAAAGCATAGGGCGGTATATGGAAGTTA 1600
BSNT_00728___ 1601 TTCAAAATGTTCTGCGCCATTTTACGCTAGCTCAACTCAAAACAAACCCG 1650
|.|||.||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1601 TCCAAGATGTTCTGCGCCATTTTACGCTAGCTCAACTCAAAACAAACCCG 1650
BSNT_00728___ 1651 GACCATAGCATGCTTCTGCTAGAGCTTTTTCAACAGCTGAAGAAGGATGG 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1651 GACCATAGCATGCTTCTGCTAGAGCTTTTTCAACAGCTGAAGAAGGATGG 1700
BSNT_00728___ 1701 CCTGATCCGTGATCCGGAAAAAGCCGAGGTTTGCCTGGCTGAGCGGGAGA 1750
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU04160___mt 1701 CCTGATCCGTGATCCGGAAAAAGCCGCGGTTTGCCTGGCTGAGCGGGAGA 1750
BSNT_00728___ 1751 AACAAGGGGGATTGGGAATCCCCGGAACAAACATGGCGCTTTATCATCTC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1751 AACAAGGGGGATTGGGAATCCCCGGAACAAACATGGCGCTTTATCATCTC 1800
BSNT_00728___ 1801 AAAAATGATGAAATCGTCCTGCCTTTTTTCAAAATGTTTGATCTCAGCAC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1801 AAAAATGATGAAATCGTCCTGCCTTTTTTCAAAATGTTTGATCTCAGCAC 1850
BSNT_00728___ 1851 CTCCTATGAAGTGGATGGCATGGACGGAATTACCCTCAGGATGACACGCA 1900
|.|||||||||||||||||||||||||||.||||||||||||||||||||
BSU04160___mt 1851 CCCCTATGAAGTGGATGGCATGGACGGAAATACCCTCAGGATGACACGCA 1900
BSNT_00728___ 1901 TCCTCGTCATGATGGCGCCTGGCTCATTATCTGCTGAAGGCTCGGAGATT 1950
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1901 TTCTCGTCATGATGGCGCCTGGCTCATTATCTGCTGAAGGCTCGGAGATT 1950
BSNT_00728___ 1951 TTAAGCGCGATCAGCTCGGCAATTATCGAGAGCGGAGAAAGCATGGCGGG 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04160___mt 1951 TTAAGCGCGATCAGCTCGGCAATTATCGAGAGCGGAGAAAGCATGGCGGG 2000
BSNT_00728___ 2001 GTTTCAGGAAGAAGGAGAACAAGAATTGTATCAGCGGTTAAACCGCATAT 2050
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04160___mt 2001 GTTTCAGGAAGAAGGAGGACAAGAATTGTATCAGCGGTTAAACCGCATAT 2050
BSNT_00728___ 2051 TTTTCACATGGATGAAAGAAAAAAACATACTGTAA 2085
|||||||||||||||||||||||||||||||||||
BSU04160___mt 2051 TTTTCACATGGATGAAAGAAAAAAACATACTGTAA 2085
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