Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00725 and BSU04140

See Amino acid alignment / Visit BSNT_00725 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:04
# Commandline: needle
#    -asequence dna-align/BSNT_00725___pbpC.1.22522.seq
#    -bsequence dna-align/BSU04140___pbpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00725___pbpC-BSU04140___pbpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00725___pbpC-BSU04140___pbpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00725___pbpC
# 2: BSU04140___pbpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2007
# Identity:    1999/2007 (99.6%)
# Similarity:  1999/2007 (99.6%)
# Gaps:           0/2007 ( 0.0%)
# Score: 9963.0
# 
#
#=======================================

BSNT_00725___      1 ATGTTAAAAAAGTGTATTCTACTAGTATTTCTATGCGTCGGATTGATTGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb      1 ATGTTAAAAAAGTGTATTCTACTAGTATTTCTATGCGTCGGATTGATTGG     50

BSNT_00725___     51 GTTAATCGGATGCTCCAAAACAGATTCACCAGAGGATCGCATGGAAGCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb     51 GTTAATCGGATGCTCCAAAACAGATTCACCAGAGGATCGCATGGAAGCAT    100

BSNT_00725___    101 TCGTGAAACAGTGGAACGATCAGCAATTCGATGACATGTATCAAAGCCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    101 TCGTGAAACAGTGGAACGATCAGCAATTCGATGACATGTATCAAAGCCTG    150

BSNT_00725___    151 ACTAAAGATGTCAAAAAAGAAATCTCCAAAAAAGATTTCGTCAACAGGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    151 ACTAAAGATGTCAAAAAAGAAATCTCCAAAAAAGATTTCGTCAACAGGTA    200

BSNT_00725___    201 TAAAGCCATCTATGAGCAGGCCGGCGTAAAAAATTTGAAAGTCACTGCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    201 TAAAGCCATCTATGAGCAGGCCGGCGTAAAAAATTTGAAAGTCACTGCGG    250

BSNT_00725___    251 GAGAAGTAGATAAGGACGATCAAGACAACAAGACGATGAAACATATCCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    251 GAGAAGTAGATAAGGACGATCAAGACAACAAGACGATGAAACATATCCCG    300

BSNT_00725___    301 TATAAAGTCAGCATGAACACAAATGCCGGCAAAGTCAGCTTCAAGAATAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    301 TATAAAGTCAGCATGAACACAAATGCCGGCAAAGTCAGCTTCAAGAATAC    350

BSNT_00725___    351 TGCTGTGCTGAAATTAGAAAAAACAGATGACGAGGAGTCATGGAATATAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    351 TGCTGTGCTGAAATTAGAAAAAACAGATGACGAGGAGTCATGGAATATAG    400

BSNT_00725___    401 ATTGGGACCCATCGTTTATTTTCAAGCAGCTGGCTGACGACAAAACCGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    401 ATTGGGACCCATCGTTTATTTTCAAGCAGCTGGCTGACGACAAAACCGTG    450

BSNT_00725___    451 CAAATTATGAGCATTGAACCGAAACGAGGCCAAATTTACGATAAAAATGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    451 CAAATTATGAGCATTGAACCGAAACGAGGCCAAATTTACGATAAAAATGG    500

BSNT_00725___    501 AAAAGGCTTAGCCGTCAATACAGATGTTCCGGAAATTGGAATTGTTCCCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    501 AAAAGGCTTAGCCGTCAATACAGATGTTCCGGAAATTGGAATTGTTCCCG    550

BSNT_00725___    551 GAGAGCTTGGCGATAAAAAAGAGAAAGTCATAAAAGAACTCGCCAAAAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    551 GAGAGCTTGGCGATAAAAAAGAGAAAGTCATAAAAGAACTCGCCAAAAAA    600

BSNT_00725___    601 CTTGATTTGACTGAAGACGACATCAAGAAAAAGCTGGATCAAGGCTGGGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    601 CTTGATTTGACTGAAGACGACATCAAGAAAAAGCTGGATCAAGGCTGGGT    650

BSNT_00725___    651 AAAAGACGATTCGTTTGTGCCGCTCAAAAAGGTCAAGCCTGACCAGGAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    651 AAAAGACGATTCGTTTGTGCCGCTCAAAAAGGTCAAGCCTGACCAGGAGA    700

BSNT_00725___    701 AATTAGTTTCTGAAGCGACGTCATTACAAGGCGTAACAAGAACGAATGTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    701 AATTAGTTTCTGAAGCGACGTCATTACAAGGCGTAACAAGAACGAATGTC    750

BSNT_00725___    751 AGCTCCCGCTACTATCCGTATGGCGAAAAGACAGCCCATTTGACAGGCTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    751 AGCTCCCGCTACTATCCGTATGGCGAAAAGACAGCCCATTTGACAGGCTA    800

BSNT_00725___    801 TGTCCGCGCCATTACAGCGGAAGAACTGAAGAAAAAGAAAGAAGGAACGT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    801 TGTCCGCGCCATTACAGCGGAAGAACTGAAGAAAAAGAAAGAAGGAACGT    850

BSNT_00725___    851 ACAGCGATACGTCTAACATCGGTATCGCCGGACTTGAAAATGTGTATGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    851 ACAGCGATACGTCTAACATCGGTATCGCCGGACTTGAAAATGTGTATGAA    900

BSNT_00725___    901 GACAAGCTAAGAGGCACAACTGGCTGGAAAATCTACGTGCCGCAAACCGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    901 GACAAGCTAAGAGGCACAACTGGCTGGAAAATCTACGTGCCGCAAACCGG    950

BSNT_00725___    951 GGAAGTCATCGCTGAAAAGAAAGCAAAGGACGGCGAGGATCTTCACCTCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb    951 GGAAGTCATCGCTGAAAAGAAAGCAAAGGACGGCGAGGATCTTCACCTCA   1000

BSNT_00725___   1001 CAATTGATATCAAAACGCAAACGAAGCTGTATGATGAACTGAAGGATGAC   1050
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04140___pb   1001 CAATTGATATCAAAACGCAAATGAAGCTGTATGATGAACTGAAGGATGAC   1050

BSNT_00725___   1051 AGCGGGGCGGCAGTCGCGCTGCAGCCGAAGACAGGCGAAACACTCGCCCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1051 AGCGGGGCGGCAGTCGCGCTGCAGCCGAAGACAGGCGAAACACTCGCCCT   1100

BSNT_00725___   1101 TGTCAGCGCGCCTTCCTACGATCCAAACGGATTTATTTTCGGCTGGAGCG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1101 TGTCAGCGCGCCTTCCTACGATCCAAACGGATTTATTTTCGGCTGGAGCG   1150

BSNT_00725___   1151 ATAAGGAATGGAAAAAGCTAAACAAAGATAAAAACAATCCGTTTTCAGCG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1151 ATAAGGAATGGAAAAAGCTAAACAAAGATAAAAACAATCCGTTTTCAGCG   1200

BSNT_00725___   1201 AAATTCAATAAGACATACGCGCCAGGTTCTACCATTAAACCGATTGCGGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1201 AAATTCAATAAGACATACGCGCCAGGTTCTACCATTAAACCGATTGCGGC   1250

BSNT_00725___   1251 TGCTATTGGAATCAAAAACGGCACCCTTAAAGCCGATGAGAAGAAAACAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1251 TGCTATTGGAATCAAAAACGGCACCCTTAAAGCCGATGAGAAGAAAACAA   1300

BSNT_00725___   1301 TCAAAGGCAAGGAGTGGCAAAAAGATTCGAGCTGGGGCGGCTATTCAGTG   1350
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04140___pb   1301 TCAAAGGCAAGGAGTGGCAAAAAGATTCAAGCTGGGGCGGCTATTCAGTG   1350

BSNT_00725___   1351 ACACGTGTGTCTGAGAGACTTCAACAAGTCGATTTGGAAAACGCCCTTAT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1351 ACACGTGTGTCTGAGAGACTTCAACAAGTCGATTTGGAAAACGCCCTTAT   1400

BSNT_00725___   1401 TACGTCAGACAATATTTATTTTGCCCAGAATGCGCTTGATATGGGAGCGG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1401 TACGTCAGACAATATTTATTTTGCCCAGAATGCGCTTGATATGGGAGCGG   1450

BSNT_00725___   1451 ACACCTTCACAAAAGGCTTGAAGACATTCGGTTTTTCAGAGGACGTTCCG   1500
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1451 ACACCTTTACAAAAGGCTTGAAGACATTCGGTTTTTCAGAGGACGTTCCG   1500

BSNT_00725___   1501 TACGAATTCCCGATCCAGAAATCGTCTATTGCAAATGACAAGCTTGATTC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1501 TACGAATTCCCGATCCAGAAATCGTCTATTGCAAATGACAAGCTTGATTC   1550

BSNT_00725___   1551 AGACATTTTGCTTGCGGATACAGGCTACGGACAAGGGCAAATGCAAATGT   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1551 AGACATTTTGCTTGCGGATACAGGCTACGGACAAGGGCAAATGCAAATGT   1600

BSNT_00725___   1601 CTCCGCTTCACTTGGCAACTGCTTACACGCCATTTGTTGACAATGGAGAC   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1601 CTCCGCTTCACTTGGCAACTGCTTACACGCCATTTGTTGACAATGGAGAC   1650

BSNT_00725___   1651 CTTGTCAAACCGACGCTGATCAAAAAAGATTCACAAACAGCTGATGTTTG   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1651 CTTGTCAAACCGACGCTGATCAAAAAAGATTCACAAACAGCTGATGTTTG   1700

BSNT_00725___   1701 GCACAAGCAAGTGGTCACGAAGGAAGGGGCGGCAGACATTACAAAAGGTC   1750
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04140___pb   1701 GCACAAGCAAGTGGTCACGAAGGAAGGAGCGGCAGACATTACAAAAGGTC   1750

BSNT_00725___   1751 TGAAAGGCGTTGTGGAAGATGAGCGCGGATCAGCGTATCAGCCTGTCGTA   1800
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU04140___pb   1751 TGAAAGGCGTTGTGGAAGATGAGCGCGGATCAGCGTATCAGCCTGTCGTG   1800

BSNT_00725___   1801 AAAGGAATCACAGTGGCCGGGAAAACAGGAACAGCCGAGCTGAAAACATC   1850
                     |||||||||||||||||.||.|||||||||||||||||||||||||||||
BSU04140___pb   1801 AAAGGAATCACAGTGGCTGGAAAAACAGGAACAGCCGAGCTGAAAACATC   1850

BSNT_00725___   1851 AAAAGATGATAAAGACGGCACGGAAAATGGCTGGTTTGTCGGCTACGATT   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1851 AAAAGATGATAAAGACGGCACGGAAAATGGCTGGTTTGTCGGCTACGATT   1900

BSNT_00725___   1901 ACAAAAACAAAGACCTGCTTGTCGCCATGATGATCCAAAATGTGCAGGAC   1950
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1901 ACGAAAACAAAGACCTGCTTGTCGCCATGATGATCCAAAATGTGCAGGAC   1950

BSNT_00725___   1951 CGCGGCGGCAGCCACTATGTCGTTGAGAAAGCGAAAAAGCAATTTCAATC   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04140___pb   1951 CGCGGCGGCAGCCACTATGTCGTTGAGAAAGCGAAAAAGCAATTTCAATC   2000

BSNT_00725___   2001 GAATTAA   2007
                     |||||||
BSU04140___pb   2001 GAATTAA   2007


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