Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00723 and BSU04130

See Amino acid alignment / Visit BSNT_00723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:04
# Commandline: needle
#    -asequence dna-align/BSNT_00723___yczJ.1.22522.seq
#    -bsequence dna-align/BSU04130___yczJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00723___yczJ-BSU04130___yczJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00723___yczJ-BSU04130___yczJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00723___yczJ
# 2: BSU04130___yczJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     284/288 (98.6%)
# Similarity:   284/288 (98.6%)
# Gaps:           0/288 ( 0.0%)
# Score: 1404.0
# 
#
#=======================================

BSNT_00723___      1 ATGGTCAGAGAGGCAGCAATGCTTCACATTAAAGAAGGCCTTGAACAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04130___yc      1 ATGGTCAGAGAGGCAGCAATGCTTCACATTAAAGAAGGCCTTGAACAAGA     50

BSNT_00723___     51 GTTTGAGGATGCATTCCGGCAAGCGGCGCCGATTATTTCCGGCATGAAGG    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU04130___yc     51 GTTTGAGGATGCATTCCGGCAAGCTGCGCCGATTATTTCCGGCATGAAGG    100

BSNT_00723___    101 GCTATATCACTCACTCGTTATCAAAATGCATGGAGGAAACTCATAAATAT    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU04130___yc    101 GCTATATCACTCACTCGTTATCAAAATGCATGGAGGAAACGCATAAATAT    150

BSNT_00723___    151 CTGCTTCTTGTGGAGTGGGAAACACTTGAGAACCATACGGAAGGCTTTCG    200
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04130___yc    151 CTGCTTCTTGTGGAGTGGGAAACACTTGAGGACCATACGGAAGGCTTTCG    200

BSNT_00723___    201 CGGTTCTTCAGAGTATCAAGAGTGGAAAGCCTTGCTTCATCGATTCTATA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04130___yc    201 CGGTTCTTCAGAGTATCAAGAGTGGAAAGCCTTGCTTCATCGGTTCTATA    250

BSNT_00723___    251 CCCCGTTCCCGACGGTCGAGCATTTTCAGGATGTGTAA    288
                     ||||||||||||||||||||||||||||||||||||||
BSU04130___yc    251 CCCCGTTCCCGACGGTCGAGCATTTTCAGGATGTGTAA    288


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