Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00721 and BSU04120

See Amino acid alignment / Visit BSNT_00721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:04
# Commandline: needle
#    -asequence dna-align/BSNT_00721___yczI.1.22522.seq
#    -bsequence dna-align/BSU04120___yczI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00721___yczI-BSU04120___yczI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00721___yczI-BSU04120___yczI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00721___yczI
# 2: BSU04120___yczI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     243/246 (98.8%)
# Similarity:   243/246 (98.8%)
# Gaps:           0/246 ( 0.0%)
# Score: 1203.0
# 
#
#=======================================

BSNT_00721___      1 TTGTTTCGGATTTTTAAAATGTCTTTTGCGGTTATCATTATTATACTGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04120___yc      1 TTGTTTCGGATTTTTAAAATGTCTTTTGCGGTTATCATTATTATACTGGC     50

BSNT_00721___     51 GCTTATTGCTTTTAACTATACGGAACACACCTCTGTTATCCAATCGGTCA    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU04120___yc     51 GCTTATTGCTTTTAACTATACGGAACACACCTCTGTAATCCAATCGGTCA    100

BSNT_00721___    101 TGCTCGTCTTTCTTGGTGCGGTCATGTTTATGCAAGGGCTTGAAGAACGC    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||.|||
BSU04120___yc    101 TGCTCGTCTTTCTTGGTGCGGTCATGTTTATGCAGGGGCTTGAAGAGCGC    150

BSNT_00721___    151 AAAAAAGAAAATGACGGCTCAGGCGCTTTTAATATTTATACCGCCGTTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04120___yc    151 AAAAAAGAAAATGACGGCTCAGGCGCTTTTAATATTTATACCGCCGTTTT    200

BSNT_00721___    201 TGTATGGTCTGTCTCCCTTATCGGTTTTACACTTCATATTATATAA    246
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU04120___yc    201 TGTATGGTCTGTCTCCCTTATCGGTTTTACACTTCATATTATATAA    246


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.