Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00717 and BSU04100

See Amino acid alignment / Visit BSNT_00717 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:04
# Commandline: needle
#    -asequence dna-align/BSNT_00717___kipR.1.22522.seq
#    -bsequence dna-align/BSU04100___kipR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00717___kipR-BSU04100___kipR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00717___kipR-BSU04100___kipR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00717___kipR
# 2: BSU04100___kipR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     750/753 (99.6%)
# Similarity:   750/753 (99.6%)
# Gaps:           0/753 ( 0.0%)
# Score: 3738.0
# 
#
#=======================================

BSNT_00717___      1 ATGCAGAATAAAAATAAAACCGTAGTCAAATCTATGGCGCTGCTTAATTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki      1 ATGCAGAATAAAAATAAAACCGTAGTCAAATCTATGGCGCTGCTTAATTT     50

BSNT_00717___     51 GTTTTTGCATAAACCAAGCCTAACCTTAAGTGAACTGGTGTCGCTGACGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki     51 GTTTTTGCATAAACCAAGCCTAACCTTAAGTGAACTGGTGTCGCTGACGG    100

BSNT_00717___    101 GAATGCCGAAGACCTCTGTTCACCGGATGGTCAGCTCCTTGGAGGAAATG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    101 GAATGCCGAAGACCTCTGTTCACCGGATGGTCAGCTCCTTGGAGGAAATG    150

BSNT_00717___    151 GGGTTCCTCAGTCGGGATGCGTCCGGCGCTTATTCGCTGGGATTGGTGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    151 GGGTTCCTCAGTCGGGATGCGTCCGGCGCTTATTCGCTGGGATTGGTGTT    200

BSNT_00717___    201 TTTGGAATTCGGACAGCTTGTCGCTGACAGGCTGGATATCAGAAAAATAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    201 TTTGGAATTCGGACAGCTTGTCGCTGACAGGCTGGATATCAGAAAAATAG    250

BSNT_00717___    251 CGAAACCGGTGATGGAAGAGCTGTGCCGGGAAGTGGATGAGGCCGTGCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    251 CGAAACCGGTGATGGAAGAGCTGTGCCGGGAAGTGGATGAGGCCGTGCAG    300

BSNT_00717___    301 TTGATCATGAGGGACGGCAATGAAGCGATATACGTTGAGAAAATAGAAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    301 TTGATCATGAGGGACGGCAATGAAGCGATATACGTTGAGAAAATAGAAGG    350

BSNT_00717___    351 GACACAGACTGTGCGGCTGTATACGGCGATCGGCAGGCGTTCCCCCCTAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    351 GACACAGACTGTGCGGCTGTATACGGCGATCGGCAGGCGTTCCCCCCTAT    400

BSNT_00717___    401 ACGCGGGAGCGTGCGCCAGAAGCATTCTGTCCTTTCTTCCCCGTGAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    401 ACGCGGGAGCGTGCGCCAGAAGCATTCTGTCCTTTCTTCCCCGTGAAGAA    450

BSNT_00717___    451 ATCGAAGCATACATCAAACAAACCGAGCTCATTTCGATTGGCTCCGGAAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    451 ATCGAAGCATACATCAAACAAACCGAGCTCATTTCGATTGGCTCCGGAAC    500

BSNT_00717___    501 GATTACCGATCCCGAAAAACTGCTTCAGGAGATTGATGCCTCTGTGCAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    501 GATTACCGATCCCGAAAAACTGCTTCAGGAGATTGATGCCTCTGTGCAAA    550

BSNT_00717___    551 ATGGCTATACTGTCAGCTATTCAGAGCTCGAAAACTATACGGCGGCGATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    551 ATGGCTATACTGTCAGCTATTCAGAGCTCGAAAACTATACGGCGGCGATC    600

BSNT_00717___    601 GGCGCCCCGATCTTTAATCATAAGCGCCAAGTGGCAGCCGGCATTAGCAT    650
                     |||||||||||||||||.|||.|||||||.||||||||||||||||||||
BSU04100___ki    601 GGCGCCCCGATCTTTAACCATGAGCGCCAGGTGGCAGCCGGCATTAGCAT    650

BSNT_00717___    651 TGCAGGCTTTGAAGCGAGATTTACAGAAGACAGGCTGCCCTATTTAACAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    651 TGCAGGCTTTGAAGCGAGATTTACAGAAGACAGGCTGCCCTATTTAACAG    700

BSNT_00717___    701 AAAAGGTGAAGGACGCCGCTTTACAGATTTCAAGAAAAATAGGATATACA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04100___ki    701 AAAAGGTGAAGGACGCCGCTTTACAGATTTCAAGAAAAATAGGATATACA    750

BSNT_00717___    751 TAA    753
                     |||
BSU04100___ki    751 TAA    753


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