Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00716 and BSU04090
See
Amino acid alignment /
Visit
BSNT_00716 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:03
# Commandline: needle
# -asequence dna-align/BSNT_00716___kipA.1.22522.seq
# -bsequence dna-align/BSU04090___kipA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00716___kipA-BSU04090___kipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00716___kipA-BSU04090___kipA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00716___kipA
# 2: BSU04090___kipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity: 996/1014 (98.2%)
# Similarity: 996/1014 (98.2%)
# Gaps: 6/1014 ( 0.6%)
# Score: 4932.0
#
#
#=======================================
BSNT_00716___ 1 TTGAGCATGAAAGTATTAAAGCCCGGACTGCTCACAACGGTTCAGGATAT 50
||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 1 ------ATGAAAGTATTAAAGCCCGGACTGCTCACAACGGTTCAGGATAT 44
BSNT_00716___ 51 AGGCAGAACGGGTTACCAAAAATACGGCGTTCTGGCCAGCGGCGCTATGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 45 AGGCAGAACGGGTTACCAAAAATACGGCGTTCTGGCCAGCGGCGCTATGG 94
BSNT_00716___ 101 ACACGGTATCACTGCGCATTGCCAATTTGTTGATAGGAAACGGTGAAAAT 150
|||||||.||||||||||||||||||.||||||||||||||||.||||||
BSU04090___ki 95 ACACGGTTTCACTGCGCATTGCCAATCTGTTGATAGGAAACGGCGAAAAT 144
BSNT_00716___ 151 GAAGCAGGTCTCGAAATAACGATGATGGGGCCCGGTCCGTCGTTTCATTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 145 GAAGCAGGTCTCGAAATAACGATGATGGGGCCCGGTCCGTCGTTTCATTT 194
BSNT_00716___ 201 TTCAAAACAGACACTGATTGCTGTGACAGGGGCGGACTTCACGCTGCGTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 195 TTCAAAACAGACACTGATTGCTGTGACAGGGGCGGACTTCACGCTGCGTA 244
BSNT_00716___ 251 TTAATGACGAGGAAGCGCCTTTATGGAAGCCTGTGCTCATTAAGGAAAAC 300
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU04090___ki 245 TTAATGACGAGGAAGCGCCTTTATGGAAGCCTGTGCTCATCAAGGAAAAC 294
BSNT_00716___ 301 AGCACAGTCAGCTTTGGCCCCTGCAAACTCGGCAGCCGTGCTTATTTGGC 350
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 295 AGCACGGTCAGCTTTGGCCCCTGCAAACTCGGCAGCCGTGCTTATTTGGC 344
BSNT_00716___ 351 GGCAGCCGGCGGCATCGAGGTGCCTGCCGTCATGGATAGTAAAAGCACAT 400
||||||.||||||||.||||||||||||||||||||.|||||||||||||
BSU04090___ki 345 GGCAGCTGGCGGCATTGAGGTGCCTGCCGTCATGGAAAGTAAAAGCACAT 394
BSNT_00716___ 401 ACGTCAGAGGAAGCATCGGCGGACTTCATGGCAGAGCGCTTCAAAAAGAA 450
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU04090___ki 395 ACGTCAGAGGAAGCATTGGCGGACTTCATGGCAGAGCGCTTCAAAAAGAA 444
BSNT_00716___ 451 GATGAACTGAACATTGGAGAGATGTCAGCTCTTTCGCAAACCATCCTTTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 445 GATGAACTGAACATTGGAGAGATGTCAGCTCTTTCGCAAACCATCCTTTC 494
BSNT_00716___ 501 CCGCTTAAGTTCGCTGCTTGGAAAACAGGGATTTGCAGCACCGAAGTGGT 550
.|||||||||||||.|||||||||||||||||||||||||||||||||||
BSU04090___ki 495 TCGCTTAAGTTCGCAGCTTGGAAAACAGGGATTTGCAGCACCGAAGTGGT 544
BSNT_00716___ 551 CAGTCAGCCGCGGCAGATTTCTGCCATTGAAGAAGAATCCCGTTATTCGG 600
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU04090___ki 545 CAGTCAGCCGCGGCAGATTTCTGCCATTGAAGAAGAATCCCGTCATTCGG 594
BSNT_00716___ 601 GTGCTGGAAGGAAAGCAATTTGCCTTTTTCACAGAAGAATCAAAAACGCG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 595 GTGCTGGAAGGAAAGCAATTTGCCTTTTTCACAGAAGAATCAAAAACGCG 644
BSNT_00716___ 651 TTTTTATGAAGAAGCATTTCGTGTCACGCCGCAGTCCGACCGTATGGGCT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 645 TTTTTATGAAGAAGCATTTCGTGTCACGCCGCAGTCCGACCGTATGGGCT 694
BSNT_00716___ 701 ACAGGCTCAAAGGAGAACCGCTCGAACTGAAGGCCCCGCTTGAGATGGTG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 695 ACAGGCTCAAAGGAGAACCGCTCGAACTGAAGGCCCCGCTTGAGATGGTG 744
BSNT_00716___ 751 TCGGAAGCGGTTTCATTCGGAACAGTTCAGGTGCCGCCTGACGGCAACCC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 745 TCGGAAGCGGTTTCATTCGGAACAGTTCAGGTGCCGCCTGACGGCAACCC 794
BSNT_00716___ 801 GATTATCCTGCTTGCAGACCGGCAGACGACTGGCGGCTATCCGAGGATCG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 795 GATTATCCTGCTTGCAGACCGGCAGACGACTGGCGGCTATCCGAGGATCG 844
BSNT_00716___ 851 CGCACATCATATCCGCTGATCTTCCGATTGTTTCCCAAATCATGCCGGGC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 845 CGCACATCATATCCGCTGATCTTCCGATTGTTTCCCAAATCATGCCGGGC 894
BSNT_00716___ 901 GAGCACGTTCAGTTTGAGCCTGTGTCCCTCCAGGAGGCAGAAGCGCTTGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 895 GAGCACGTTCAGTTTGAGCCTGTGTCCCTCCAGGAGGCAGAAGCGCTTGC 944
BSNT_00716___ 951 GGTAGAACGGGAACAGCATATAAAAGAACTGAAAACGAGAATGAAGATGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04090___ki 945 GGTAGAACGGGAACAGCATATAAAAGAACTGAAAACGAGAATGAAGATGG 994
BSNT_00716___ 1001 AATGGCTGACATAG 1014
||||||||||||||
BSU04090___ki 995 AATGGCTGACATAG 1008
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.