Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00710 and BSU04050

See Amino acid alignment / Visit BSNT_00710 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:03
# Commandline: needle
#    -asequence dna-align/BSNT_00710___ycsF.1.22522.seq
#    -bsequence dna-align/BSU04050___ycsF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00710___ycsF-BSU04050___ycsF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00710___ycsF-BSU04050___ycsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00710___ycsF
# 2: BSU04050___ycsF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     765/774 (98.8%)
# Similarity:   765/774 (98.8%)
# Gaps:           0/774 ( 0.0%)
# Score: 3789.0
# 
#
#=======================================

BSNT_00710___      1 GTGTTTCAGATTGATTTAAACTGTGATTTAGGAGAAAGCTTCGGATCCTA     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04050___yc      1 GTGTTTCAGATTGATTTAAACTGTGATTTAGGAGAAAGCTTCGGAGCCTA     50

BSNT_00710___     51 CAAGATAGGTCTTGACCAAGATATTTTAGAGTATGTGACATCAGCGAATA    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04050___yc     51 CAAGATAGGCCTTGACCAAGATATTTTAGAGTATGTGACATCAGCGAATA    100

BSNT_00710___    101 TCGCATGCGGATTTCATGCAGGAGATCCTAGTGTTATGCGAAAAACCGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    101 TCGCATGCGGATTTCATGCAGGAGATCCTAGTGTTATGCGAAAAACCGTC    150

BSNT_00710___    151 GCGCTTGCAGCGGAAAAAGGCGTAAAAATCGGTGCGCATCCGGGCTTGCC    200
                     |||||||||||.||||.||||||.|||||.||||||||||||||||||||
BSU04050___yc    151 GCGCTTGCAGCAGAAAGAGGCGTGAAAATGGGTGCGCATCCGGGCTTGCC    200

BSNT_00710___    201 GGATTTACTCGGTTTTGGGCGCCGCAATATGGCGATTTCTCCTGAGGAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    201 GGATTTACTCGGTTTTGGGCGCCGCAATATGGCGATTTCTCCTGAGGAAG    250

BSNT_00710___    251 CGTATGATCTTGTCGTTTATCAAATTGGCGCGCTCTCTGGCTTTCTAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    251 CGTATGATCTTGTCGTTTATCAAATTGGCGCGCTCTCTGGCTTTCTAAAA    300

BSNT_00710___    301 GCAGAGGGACTTCACATGCAGCACGTCAAGCCGCATGGCGCTTTATACAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    301 GCAGAGGGACTTCACATGCAGCACGTCAAGCCGCATGGCGCTTTATACAA    350

BSNT_00710___    351 TATGGCGGCAGTCGATCAAAAACTGTCGGATGCTATCGCGAAAGCTGTCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    351 TATGGCGGCAGTCGATCAAAAACTGTCGGATGCTATCGCGAAAGCTGTCT    400

BSNT_00710___    401 ATAAGATTGATCCAGGCCTGATTCTTTTCGGTCTTGCTGAGAGTGAGCTT    450
                     |||||.|||||||.|||||||||||||||||||||||||||||.||||||
BSU04050___yc    401 ATAAGGTTGATCCCGGCCTGATTCTTTTCGGTCTTGCTGAGAGCGAGCTT    450

BSNT_00710___    451 GTAAAAGCGGGAGAACGGATCGGACTTCAGACCGCAAATGAAGTGTTCGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    451 GTAAAAGCGGGAGAACGGATCGGACTTCAGACCGCAAATGAAGTGTTCGC    500

BSNT_00710___    501 CGACAGAACATACCAATCGGACGGCACGCTGACACCGCGCTCCCAGCCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    501 CGACAGAACATACCAATCGGACGGCACGCTGACACCGCGCTCCCAGCCGG    550

BSNT_00710___    551 ACGCACTCATTGAAAGTGATGATGCCGCCGTCACCCAGGTCATCAAAATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    551 ACGCACTCATTGAAAGTGATGATGCCGCCGTCACCCAGGTCATCAAAATG    600

BSNT_00710___    601 GTGAAAGAAGGGGCGGTCAAATCTCAGCAAGGACATGATGTGTCATTAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    601 GTGAAAGAAGGGGCGGTCAAATCTCAGCAAGGACATGATGTGTCATTAAA    650

BSNT_00710___    651 AGCAGATACAGTCTGCATTCATGGAGATGGAGCCCATGCGCTGACATTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    651 AGCAGATACAGTCTGCATTCATGGAGATGGAGCCCATGCGCTGACATTTG    700

BSNT_00710___    701 CGCAAAAAATCAGAAAACAGCTCAAAGCGGCTGGAATTGAAGTGACAGCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04050___yc    701 CGCAAAAAATCAGAAAACAGCTCAAAGCGGCTGGAATTGAAGTGACAGCT    750

BSNT_00710___    751 ATTTCAGAACAGAGGTCAACATAA    774
                     ||||||||||||||||||||||||
BSU04050___yc    751 ATTTCAGAACAGAGGTCAACATAA    774


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