Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00701 and BSU04000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:02
# Commandline: needle
# -asequence dna-align/BSNT_00701___ycsA.1.22522.seq
# -bsequence dna-align/BSU04000___ycsA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00701___ycsA-BSU04000___ycsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00701___ycsA-BSU04000___ycsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00701___ycsA
# 2: BSU04000___ycsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1065
# Identity: 1046/1065 (98.2%)
# Similarity: 1046/1065 (98.2%)
# Gaps: 6/1065 ( 0.6%)
# Score: 5178.0
#
#
#=======================================
BSNT_00701___ 1 ------ATGAAACAATTCGAGATTGCGGCAATACCGGGATACGGTGTAGG 44
|||||||||||.|||||||||||||||||||||.||||.|||||
BSU04000___yc 1 ATGACGATGAAACAATTTGAGATTGCGGCAATACCGGGAGACGGAGTAGG 50
BSNT_00701___ 45 AAAAGAGGTTGTAGCGGCTGCTGAGAAAGTGCTTCATACAGCCGCTGAGG 94
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04000___yc 51 AAAAGAGGTTGTAGCGGCTGCTGAGAAAGTGCTTCATACAGCGGCTGAGG 100
BSNT_00701___ 95 TACACGGAGGTTTGTCATTCTCATTCACGGCTTTTCCATGGAGCTGTGAT 144
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04000___yc 101 TACACGGAGGTTTGTCATTCTCATTCACAGCTTTTCCATGGAGCTGTGAT 150
BSNT_00701___ 145 TATTACTTGGAGCACGGCAAAATGATGCCCGAAGATGGAATACATACGCT 194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 151 TATTACTTGGAGCACGGCAAAATGATGCCCGAAGATGGAATACATACGCT 200
BSNT_00701___ 195 TACTCAATTTGAAGCGGTTTTTTTGGGAGCCGTCGGAAATCCGAAGCTGG 244
|||||||||||||||.||||||||||||||.|||||||||||||||||||
BSU04000___yc 201 TACTCAATTTGAAGCAGTTTTTTTGGGAGCTGTCGGAAATCCGAAGCTGG 250
BSNT_00701___ 245 TTCCCGATCATATATCGTTATGGGGACTGCTGCTGAAAATCCGGAGGGAG 294
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04000___yc 251 TTCCCGATCATATATCGTTATGGGGGCTGCTGCTGAAAATCCGGAGGGAG 300
BSNT_00701___ 295 CTTGAGCTTTCCATTAATATGAGACCCGCCAAACAAATGGCAGGCATTAC 344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 301 CTTGAGCTTTCCATTAATATGAGACCCGCCAAACAAATGGCAGGCATTAC 350
BSNT_00701___ 345 GTCGCCGCTTCTGCATCCAAATGATTTTGACTTCGTGGTGATTCGCGAGA 394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 351 GTCGCCGCTTCTGCATCCAAATGATTTTGACTTCGTGGTGATTCGCGAGA 400
BSNT_00701___ 395 ACAGTGAAGGTGAATACAGTGAAGTCGGCGGGCGCATTCACAGAGGCGAT 444
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04000___yc 401 ACAGTGAAGGTGAATACAGTGAAGTTGGCGGGCGCATTCACAGAGGCGAT 450
BSNT_00701___ 445 GATGAAATCGCCATCCAGAATGCCGTGTTTACGAGAAAAGCGACAGAACG 494
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 451 GATGAAATCGCCATCCAGAATGCCGTGTTTACGAGAAAAGCGACAGAACG 500
BSNT_00701___ 495 TGTCATGCGCTTTGCCTTCGAATTGGCGAAAAAACGGCGCAGCCATGTGA 544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 501 TGTCATGCGCTTTGCCTTCGAATTGGCGAAAAAACGGCGCAGCCATGTGA 550
BSNT_00701___ 545 CAAGCGCCACAAAGTCTAACGGCATTTATCATGCGATGCCGTTTTGGGAT 594
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU04000___yc 551 CAAGCGCCACAAAGTCTAACGGCATTTATCACGCGATGCCGTTTTGGGAT 600
BSNT_00701___ 595 GAAGTCTTTCAGCAGACAGCCGCTGATTATAGCGGAATCGAAACATCATC 644
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 601 GAAGTCTTTCAGCAGACAGCCGCTGATTATAGCGGAATCGAAACATCATC 650
BSNT_00701___ 645 TCAGCATATTGATGCGCTGGCCGCTTTTTTTGTGACGCGTCCGGAAACGT 694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 651 TCAGCATATTGATGCGCTGGCCGCTTTTTTTGTGACGCGTCCGGAAACGT 700
BSNT_00701___ 695 TTGATGTCATTGTGGCGAGCAACTTGTTCGGTGATATTTTAACCGACATC 744
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 701 TTGATGTCATTGTGGCGAGCAACTTGTTCGGTGATATTTTAACCGACATC 750
BSNT_00701___ 745 AGCTCAAGCCTGATGGGAAGCATCGGCATTGCGCCTTCTGCGAACATCAA 794
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 751 AGCTCAAGCCTGATGGGAAGCATCGGCATTGCGCCTTCTGCGAACATCAA 800
BSNT_00701___ 795 TCCATCCGGCAAATATCCGTCCATGTTTGAACCGGTTCACGGCTCAGCTC 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 801 TCCATCCGGCAAATATCCGTCCATGTTTGAACCGGTTCACGGCTCAGCTC 850
BSNT_00701___ 845 CTGACATTGCCGGACAGGGCCTTGCCAATCCGATTGGCCAGATTTGGACA 894
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU04000___yc 851 CTGACATTGCCGGACAGGGCCTTGCCAATCCGATCGGCCAGATTTGGACA 900
BSNT_00701___ 895 GCGAAGCTGATGCTCGACCACTTCGGAGAGGAAGAGCTGGGGGCGAAAAT 944
|||||||||||||||||||||||||||||||||||..|||||||||||||
BSU04000___yc 901 GCGAAGCTGATGCTCGACCACTTCGGAGAGGAAGAATTGGGGGCGAAAAT 950
BSNT_00701___ 945 TCTGGATGTAATGGAGCAAGTGACTGCCGACGGCATCAAAACACGCGACA 994
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 951 TCTGGATGTAATGGAGCAAGTGACTGCCGACGGCATCAAAACACGCGACA 1000
BSNT_00701___ 995 TTGGGGGACAAAGCACAACGGCTGAGGTCACTGATGAAATCTGTTCGCGC 1044
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04000___yc 1001 TTGGGGGACAAAGCACAACGGCTGAGGTCACTGATGAAATCTGTTCGCGC 1050
BSNT_00701___ 1045 TTAAGAAAGCTCTGA 1059
|||||||||||||||
BSU04000___yc 1051 TTAAGAAAGCTCTGA 1065
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