Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00695 and BSU03960

See Amino acid alignment / Visit BSNT_00695 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:01
# Commandline: needle
#    -asequence dna-align/BSNT_00695___ycnK.1.22522.seq
#    -bsequence dna-align/BSU03960___ycnK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00695___ycnK-BSU03960___ycnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00695___ycnK-BSU03960___ycnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00695___ycnK
# 2: BSU03960___ycnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 573
# Identity:     561/573 (97.9%)
# Similarity:   561/573 (97.9%)
# Gaps:           0/573 ( 0.0%)
# Score: 2757.0
# 
#
#=======================================

BSNT_00695___      1 ATGCTTCCGATTAATAGACAGCAACACATACTGAAGTGGCTGAAAGAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc      1 ATGCTTCCGATTAATAGACAGCAACACATACTGAAGTGGCTGAAAGAAGA     50

BSNT_00695___     51 AGGCTCGCTTAGAATTTCTGACATCAGCGCAAGGTTCGGCGTTTCGGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc     51 AGGCTCGCTTAGAATTTCTGACATCAGCGCAAGGTTCGGCGTTTCGGAAA    100

BSNT_00695___    101 TGACGGTATATAGAGATGTCAATCAGCTGGTTCAGTCAAATCAGGTCATA    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03960___yc    101 TGACGGTATATAGAGATGTCAATCAGCTGGTTCAGTCAAATCAGGTCATT    150

BSNT_00695___    151 AAAACCGCCGGCGGCATCACGCTCCCCGTCCGAACACCTCAAACAGATCA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc    151 AAAACGGCCGGCGGCATCACGCTCCCCGTCCGAACACCTCAAACAGATCA    200

BSNT_00695___    201 TATGTGCAGCTATTGCTTGAAGCCAGTCAATCAAGCTCATTCGGTTCAGC    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03960___yc    201 TATGTGCAGCTATTGCTTGAAGCCCGTCAATCAAGCTCATTCGGTTCAGC    250

BSNT_00695___    251 TGATTACGGTAAACCAAGACATTGAACAGCTATGCTGCGCACATTGCGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc    251 TGATTACGGTAAACCAAGACATTGAACAGCTATGCTGCGCACATTGCGCG    300

BSNT_00695___    301 TTTTTGCGTTACGCGGATAAAACGGAAGAGGTTTCACACTTGATTTGCAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc    301 TTTTTGCGTTACGCGGATAAAACGGAAGAGGTTTCACACTTGATTTGCAG    350

BSNT_00695___    351 AGATTTTCTGTTACAGACAACCGTCAGTGCCGGTTCGGCTTATTTCGTCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03960___yc    351 AGATTTTCTGTTACAGACAACCGTCAGTGCCGGTTCGGCTTATTTCGTCG    400

BSNT_00695___    401 TAAATGCTGAATTGAACCTGCACTGCTGCCAGCCGCAGGCCATTCCGTTT    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU03960___yc    401 TAAATGCTGAATTAAACCTGCACTGCTGCCAGCCGCAGGCCATTCCGTTT    450

BSNT_00695___    451 GCGACGCTCGATCATGCCGAACGATTTCAAAAAGGATTCGGCGGCGCCGT    500
                     |||||.||.||.||||||||||||||||||||||||||||||||.|||||
BSU03960___yc    451 GCGACACTTGACCATGCCGAACGATTTCAAAAAGGATTCGGCGGAGCCGT    500

BSNT_00695___    501 CCGCACTTTCGACCAAGCGCTGGAAGACATGCTCAAAGACAGAAAGAAAC    550
                     |.|||||||||||||||||||||||||||||||..|||||.|||||||||
BSU03960___yc    501 CTGCACTTTCGACCAAGCGCTGGAAGACATGCTTCAAGACCGAAAGAAAC    550

BSNT_00695___    551 GCTGCACCTGCACCAAGAAATAA    573
                     |||||||||||||||||||||||
BSU03960___yc    551 GCTGCACCTGCACCAAGAAATAA    573


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