Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00682 and BSU03870

See Amino acid alignment / Visit BSNT_00682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:59
# Commandline: needle
#    -asequence dna-align/BSNT_00682___ycnE.1.22522.seq
#    -bsequence dna-align/BSU03870___ycnE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00682___ycnE-BSU03870___ycnE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00682___ycnE-BSU03870___ycnE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00682___ycnE
# 2: BSU03870___ycnE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     285/288 (99.0%)
# Similarity:   285/288 (99.0%)
# Gaps:           0/288 ( 0.0%)
# Score: 1413.0
# 
#
#=======================================

BSNT_00682___      1 ATGATCGTATTACAAGCTTACATCAAAGTAAAACCAGAAAAACGCGAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03870___yc      1 ATGATCGTATTACAAGCTTACATCAAAGTAAAACCAGAAAAACGCGAGGA     50

BSNT_00682___     51 ATTTTTGAGCGAGGCTCAATCGCTTGTTCAGCATTCAAGAGCTGAGGAAG    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU03870___yc     51 ATTTTTGAGCGAGGCTCAATCACTTGTTCAGCATTCAAGAGCTGAGGAAG    100

BSNT_00682___    101 GCAACGCGCAATACGACCTATTCGAAAAAGTAGGCGAAGAAAATACATTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03870___yc    101 GCAACGCGCAATACGACCTATTCGAAAAAGTAGGCGAAGAAAATACATTT    150

BSNT_00682___    151 GTCATGCTTGAAAAATGGAAAGATGAAGCGGCAATGAAATTCCATAACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03870___yc    151 GTCATGCTTGAAAAATGGAAAGATGAAGCGGCAATGAAATTCCATAACGA    200

BSNT_00682___    201 AACTGCGCATTTCCAAGGGTTTGTCGCAAAAGGAAAAGAACTGCTGAGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03870___yc    201 AACTGCGCATTTCCAAGGGTTTGTCGCAAAAGGAAAAGAACTGCTGAGCG    250

BSNT_00682___    251 CCCCTCTTGATGTTGTCCGCACAGAGCTTAGTGAGTAA    288
                     |.|||||||||||||||||||||||||||||.||||||
BSU03870___yc    251 CTCCTCTTGATGTTGTCCGCACAGAGCTTAGCGAGTAA    288


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.