Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00680 and BSU03850

See Amino acid alignment / Visit BSNT_00680 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:59
# Commandline: needle
#    -asequence dna-align/BSNT_00680___ycnC.1.22522.seq
#    -bsequence dna-align/BSU03850___ycnC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00680___ycnC-BSU03850___ycnC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00680___ycnC-BSU03850___ycnC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00680___ycnC
# 2: BSU03850___ycnC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 879
# Identity:     874/879 (99.4%)
# Similarity:   874/879 (99.4%)
# Gaps:           0/879 ( 0.0%)
# Score: 4350.0
# 
#
#=======================================

BSNT_00680___      1 ATGCTTGATAAAAAAACAGATATCTTGTTAGCCGCGCGAAAGCTTTTTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc      1 ATGCTTGATAAAAAAACAGATATCTTGTTAGCCGCGCGAAAGCTTTTTTC     50

BSNT_00680___     51 GGAAAAGGATTTTACGTCGGTTTCCATGCAGGCGATCGCAGAAGAATGTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc     51 GGAAAAGGATTTTACGTCGGTTTCCATGCAGGCGATCGCAGAAGAATGTA    100

BSNT_00680___    101 AGATGTCAAAAGCTTCGATATATAAGCTGTTTCAATCTAAAGAAGATCTG    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU03850___yc    101 AGATGTCAAAAGCTTCGATATATAAGCTGTTCCAATCTAAAGAAGATCTG    150

BSNT_00680___    151 CTTTTGGAGCTGCTGTCATTTAACCAGAAGCAAATGGTGGCCGCGGCCTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    151 CTTTTGGAGCTGCTGTCATTTAACCAGAAGCAAATGGTGGCCGCGGCCTC    200

BSNT_00680___    201 AAGACTTCAGGAAAATACCGCACTTACACCGGAGGAGCGTTTGACGCAAA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03850___yc    201 AAGACTTCAGGAAAATACAGCACTTACACCGGAGGAGCGTTTGACGCAAA    250

BSNT_00680___    251 AGGTCAAAATGGAACTGGAGGGCTTCAGGCGGAATCAGCAGTTTTTCAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    251 AGGTCAAAATGGAACTGGAGGGCTTCAGGCGGAATCAGCAGTTTTTCAAT    300

BSNT_00680___    301 ATGCTGACCTACGGAAACCCCAAGCTGCATAATGACCGGGTCAAACAGCA    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU03850___yc    301 ATGCTGACCTACGGAAACCCCAAGCTGCACAATGACCGGGTCAAACAGCA    350

BSNT_00680___    351 TATCCATCAGACCAGATCGACGATTATCTGCTGGCACCGCGATTCGCTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    351 TATCCATCAGACCAGATCGACGATTATCTGCTGGCACCGCGATTCGCTGA    400

BSNT_00680___    401 TCCAGGCGTATGGAGAAACCATTCTCCCGTTTGTGTGGGATTTGGTTATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    401 TCCAGGCGTATGGAGAAACCATTCTCCCGTTTGTGTGGGATTTGGTTATC    450

BSNT_00680___    451 ATTCTTCACGGCATGATGCGTGAGTTTTTAATGCTGATCAAAATCGAGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    451 ATTCTTCACGGCATGATGCGTGAGTTTTTAATGCTGATCAAAATCGAGGA    500

BSNT_00680___    501 AAAACCGCTTGAGCTTGACCCGATCGCAGAGTTTATCATCAGCACCCTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    501 AAAACCGCTTGAGCTTGACCCGATCGCAGAGTTTATCATCAGCACCCTCA    550

BSNT_00680___    551 ATCAGATTATCAAAAACAGGGAAACCCGCCAGTCTCTTCTTCCGCCCGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    551 ATCAGATTATCAAAAACAGGGAAACCCGCCAGTCTCTTCTTCCGCCCGAA    600

BSNT_00680___    601 GCCATCGAGCTTTATATTCATTCAGCATCCTCCTACAAGCCAAAGGATAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    601 GCCATCGAGCTTTATATTCATTCAGCATCCTCCTACAAGCCAAAGGATAA    650

BSNT_00680___    651 ATCAGTCCTATTATCGGAAAGCCTGAAGGAATTACATAAAGGCATCTCTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    651 ATCAGTCCTATTATCGGAAAGCCTGAAGGAATTACATAAAGGCATCTCTT    700

BSNT_00680___    701 CCCTGTCCGCCGCGGACTATGACGTAGATGAACTGACATCCGCAGCCGCC    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03850___yc    701 CCCTGTCCGCCGCGGACTATGACGTAGATGAACTGACATCCGCAGCCGCT    750

BSNT_00680___    751 ATGCTGGAGGAAGAAGCGAAGAAGGAAGAACCCCGCGCTTTTTTACTCAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03850___yc    751 ATGCTGGAGGAAGAAGCGAAGAAGGAAGAACCCCGCGCTTTTTTACTCAA    800

BSNT_00680___    801 ATCACTGATTGGCTATCTGGAACAAACCAGTGTTTTAACACAGCCCGTTT    850
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU03850___yc    801 ATCACTGATTGGCTATCTGGAACAAACCGGTGTTTTAACACAGCCCGTTT    850

BSNT_00680___    851 CCATGTTAAAAACACTGTTAATTACTTAG    879
                     |||||||||||||||||||||||||||||
BSU03850___yc    851 CCATGTTAAAAACACTGTTAATTACTTAG    879


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