Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00679 and BSU03840

See Amino acid alignment / Visit BSNT_00679 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:59
# Commandline: needle
#    -asequence dna-align/BSNT_00679___ycnB.1.22522.seq
#    -bsequence dna-align/BSU03840___ycnB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00679___ycnB-BSU03840___ycnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00679___ycnB-BSU03840___ycnB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00679___ycnB
# 2: BSU03840___ycnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1419
# Identity:    1407/1419 (99.2%)
# Similarity:  1407/1419 (99.2%)
# Gaps:           0/1419 ( 0.0%)
# Score: 6987.0
# 
#
#=======================================

BSNT_00679___      1 TTGAACACAAGTATTGAACAAAAACCTTTTAACCGTTCTGTCATTGTCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc      1 TTGAACACAAGTATTGAACAAAAACCTTTTAACCGTTCTGTCATTGTCGG     50

BSNT_00679___     51 CATTTTGTTAGCCGGAGCGTTTGTGGCGATTTTGAACCAGACATTGTTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc     51 CATTTTGTTAGCCGGAGCGTTTGTGGCGATTTTGAACCAGACATTGTTGA    100

BSNT_00679___    101 TTACCGCACTTCCCCATATCATGAGGGATTTCAATGTCGATGCCAACCAA    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    101 TTACTGCACTTCCCCATATCATGAGGGATTTCAATGTCGATGCCAACCAA    150

BSNT_00679___    151 GCACAATGGCTGACCACATCATTTATGTTAACCAATGGGATTTTAATTCC    200
                     ||||||||||||||.||||||||||||||||||||.||||||||||||||
BSU03840___yc    151 GCACAATGGCTGACAACATCATTTATGTTAACCAACGGGATTTTAATTCC    200

BSNT_00679___    201 GATTACCGCGTTTTTAATTGAGAAATTCACAAGCCGGGCGCTGCTCATCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    201 GATTACCGCGTTTTTAATTGAGAAATTCACAAGCCGGGCGCTGCTCATCA    250

BSNT_00679___    251 CAGCAATGAGCATTTTCACTGCCGGAACAGTCGTCGGAGCGTTCGCGCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    251 CAGCAATGAGCATTTTCACTGCCGGAACAGTCGTCGGAGCGTTCGCGCCG    300

BSNT_00679___    301 AACTTCCCGGTTCTGCTGACAGCGCGTATCATTCAAGCGGCTGGAGCCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    301 AACTTCCCGGTTCTGCTGACAGCGCGTATCATTCAAGCGGCTGGAGCCGG    350

BSNT_00679___    351 CATTATGATGCCGCTCATGCAGACTGTATTCCTGACAATCTTTCCGATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    351 CATTATGATGCCGCTCATGCAGACTGTATTCCTGACAATCTTTCCGATTG    400

BSNT_00679___    401 AAAAGCGCGGCCAGGCTATGGGTATGGTCGGATTGGTCATCTCATTCGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    401 AAAAGCGCGGCCAGGCTATGGGTATGGTCGGATTGGTCATCTCATTCGCG    450

BSNT_00679___    451 CCTGCGATCGGACCGACTCTTTCCGGATGGGCTGTCGAAGCTTTCTCTTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    451 CCTGCGATCGGACCGACTCTTTCCGGATGGGCTGTCGAAGCTTTCTCTTG    500

BSNT_00679___    501 GAGATCATTGTTTTATATTATTCTACCGTTTGCTGTGATTGATTTGATTC    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03840___yc    501 GAGATCATTGTTTTATATTATTCTTCCGTTTGCTGTGATTGATTTGATTC    550

BSNT_00679___    551 TTGCCAGCATCCTGATGAAAAACGTGACGACTTTAAGAAAAACACAGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    551 TTGCCAGCATCCTGATGAAAAACGTGACGACTTTAAGAAAAACACAGATT    600

BSNT_00679___    601 GATATTTTATCAGTCATCCTTTCAACATTTGGGTTCGGCGGCCTTCTGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    601 GATATTTTATCAGTCATCCTTTCAACATTTGGGTTCGGCGGCCTTCTGTA    650

BSNT_00679___    651 CGGCTTCTCAAGCGTCGGCTCTTACGGCTGGTCCAGTTCAACCGTCTTGA    700
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03840___yc    651 CGGCTTCTCAAGCGTCGGCTCTTATGGCTGGTCCAGTTCAACCGTCTTGA    700

BSNT_00679___    701 TTTCACTGCTGGTGGGTGTCATCGCGCTGCTCTTGTTTATCACAAGACAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    701 TTTCACTGCTGGTGGGTGTCATCGCGCTGCTCTTGTTTATCACAAGACAA    750

BSNT_00679___    751 ATGAAGCTTGAAAAACCGATGCTGGAATTCCGCGTCTTCACGTTTGGCGT    800
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    751 ATGAAGCTTAAAAAACCGATGCTGGAATTCCGCGTCTTCACGTTTGGCGT    800

BSNT_00679___    801 TTTCAGCTTAACAACACTGCTGGGAACCCTCGTCTTTGCATTATTGATCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    801 TTTCAGCTTAACAACACTGCTGGGAACCCTCGTCTTTGCATTATTGATCG    850

BSNT_00679___    851 GTACGGAAACCATCCTGCCGCTTTATACACAAAATGTCAGAGACGTCACA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    851 GTACGGAAACCATCCTGCCGCTTTATACACAAAATGTCAGAGACGTCACA    900

BSNT_00679___    901 GCTTTTGATACAGGGCTTATGCTCCTTCCGGGAGCCGTTGTGATGGGCTT    950
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU03840___yc    901 GCTTTTGATACAGGGCTTATGCTCCTGCCGGGAGCCGTTGTGATGGGCTT    950

BSNT_00679___    951 TATGTCGCCGATTATCGGCAGAATTTTTGACCGTGTCGGCGGAAGAGGGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc    951 TATGTCGCCGATTATCGGCAGAATTTTTGACCGTGTCGGCGGAAGAGGGC   1000

BSNT_00679___   1001 TGGCGATTGCCGGTTTCTGCATCATCTTCCTGACATCTCTGCCGTTTATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1001 TGGCGATTGCCGGTTTCTGCATCATCTTCCTGACATCTCTGCCGTTTATG   1050

BSNT_00679___   1051 CAGCTGACTGACCATACGTCACTCGCTTGGATTGTCGTTTTATACACCGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1051 CAGCTGACTGACCATACGTCACTCGCTTGGATTGTCGTTTTATACACCGT   1100

BSNT_00679___   1101 TCGTCTCTTAGGCACCGCCATGATCATGATGCCGGTGACAACAGCCGGAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1101 TCGTCTCTTAGGCACCGCCATGATCATGATGCCGGTGACAACAGCCGGAA   1150

BSNT_00679___   1151 TCAACGCGCTGCCGCGCCACTTGATTCCGCACGGAACTGCGATGAACAAC   1200
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1151 TCAATGCGCTGCCGCGCCACTTGATTCCGCACGGAACTGCGATGAACAAC   1200

BSNT_00679___   1201 ACGATTCGCCAAGTCGGCGGCTCGATCGGAACCGCACTATTGGTTTCCGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1201 ACGATTCGCCAAGTCGGCGGCTCGATCGGAACCGCACTATTGGTTTCCGT   1250

BSNT_00679___   1251 GATGAGCAACCAGGCCGCACATGCAGGCACGACAAATGTGAAGCACGCTG   1300
                     |||||||||||||||.||||||||||||||||||||||||||||||||.|
BSU03840___yc   1251 GATGAGCAACCAGGCGGCACATGCAGGCACGACAAATGTGAAGCACGCCG   1300

BSNT_00679___   1301 CCCTGCACGGCATGAACGCCGCTTTTATTGTGGCTGCCGTCATTGCACTT   1350
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU03840___yc   1301 CCCTGCACGGCATGAACGCCGCTTTTATAGTGGCTGCCGTCATTGCACTT   1350

BSNT_00679___   1351 GTCGGCTTCCTTCTCTCATTCACATTAAAGAAACCTCAGCGCCCTGCCGA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03840___yc   1351 GTCGGCTTCCTTCTCTCATTCACATTAAAGAAACCTCAGCGCCCTGCCGA   1400

BSNT_00679___   1401 ACAGCAGCCGGCACGCTAA   1419
                     |||||||||||||||||.|
BSU03840___yc   1401 ACAGCAGCCGGCACGCTGA   1419


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