Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00677 and BSU03830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:59
# Commandline: needle
# -asequence dna-align/BSNT_00677___yclQ.1.22522.seq
# -bsequence dna-align/BSU03830___yclQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00677___yclQ-BSU03830___yclQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00677___yclQ-BSU03830___yclQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00677___yclQ
# 2: BSU03830___yclQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity: 880/954 (92.2%)
# Similarity: 880/954 (92.2%)
# Gaps: 0/954 ( 0.0%)
# Score: 4104.0
#
#
#=======================================
BSNT_00677___ 1 ATGAAAAAGTTCGCATTACTATTCATCGCTTTGGTGACGGCAGTTGTGAT 50
||||||||||||||.||||||||||||||||||||.||.||.|||||.||
BSU03830___yc 1 ATGAAAAAGTTCGCGTTACTATTCATCGCTTTGGTCACTGCCGTTGTCAT 50
BSNT_00677___ 51 TTCTGCATGCGGAAACCAAAGCACAAGCAGCAAAGGTTCTGATTCTAAGG 100
|||||||||||||||||||||||||||||||||||||||||||.|.|||.
BSU03830___yc 51 TTCTGCATGCGGAAACCAAAGCACAAGCAGCAAAGGTTCTGATACAAAGA 100
BSNT_00677___ 101 AAGAACAAATCACGGTGAAACACCAGCTGGACAAAAACGGAACAAAAGTA 150
|||||||||||||.||||||||||||||.|||||||||||.|||||||||
BSU03830___yc 101 AAGAACAAATCACAGTGAAACACCAGCTCGACAAAAACGGCACAAAAGTA 150
BSNT_00677___ 151 CCGAAGAGCCCTAAAAAAGTTGTCGTATTTGACTTTGGAAGCTTAGATAC 200
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU03830___yc 151 CCGAAGAACCCTAAAAAAGTTGTCGTATTTGACTTTGGAAGCTTAGATAC 200
BSNT_00677___ 201 ACTAGATAAACTTGGTCTTGATGATAAAGTAGCGGGACTGCCGAAACAAG 250
|.||||||||||.||.||||||||||.|||||||||.|||||||||||||
BSU03830___yc 201 ATTAGATAAACTAGGACTTGATGATATAGTAGCGGGCCTGCCGAAACAAG 250
BSNT_00677___ 251 CCCTTCCTAAATATCTGTCCAAATTCAAGGATGACAAATATGCTGACGTC 300
.|||||||||||||||||||||||||||||||||||||||.|||||.|||
BSU03830___yc 251 TCCTTCCTAAATATCTGTCCAAATTCAAGGATGACAAATACGCTGATGTC 300
BSNT_00677___ 301 GGAAGCTTAAAAGAGCCAGACTTCGAGAAAGTGGCAGATTTAGACCCTGA 350
||.|||||||||||||||||||||||.|||||||||||.|||||.|||||
BSU03830___yc 301 GGCAGCTTAAAAGAGCCAGACTTCGACAAAGTGGCAGAATTAGATCCTGA 350
BSNT_00677___ 351 CTTGATCATTATCTCAGGAAGACAATCTGAGTCTTACAAAGAATTCTCTG 400
..||||||||||.||||.|||||||||||||||||||||||||||||||.
BSU03830___yc 351 TCTGATCATTATTTCAGCAAGACAATCTGAGTCTTACAAAGAATTCTCTA 400
BSNT_00677___ 401 AAATTGCGCCGACAATTTACCTTGGCGTAGACACAGCGAAGTATATGGAA 450
|||||||||||||.|||||||||||.|||||.|||||||||||.||||||
BSU03830___yc 401 AAATTGCGCCGACGATTTACCTTGGTGTAGATACAGCGAAGTACATGGAA 450
BSNT_00677___ 451 TCATTTAAGTCTGACGCAGAAACAATCGGTAAGATCTTCGATAAAGAAGA 500
||||||||.||.|||||.||||||||||||||.|||||.|||||||||||
BSU03830___yc 451 TCATTTAAATCAGACGCTGAAACAATCGGTAAAATCTTTGATAAAGAAGA 500
BSNT_00677___ 501 TGAAGTGAAGGATGAACTCGCAAAAATCGATCATTCAATCGCAGATGTAA 550
..|||||||.|||||.||||||||.||.|||||.||||||||||||||||
BSU03830___yc 501 CAAAGTGAAAGATGAGCTCGCAAACATTGATCACTCAATCGCAGATGTAA 550
BSNT_00677___ 551 AGAAAACGGCTGAAAAGCTTAACAAAAACGGTCTCGTCATCATGGCGAAC 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU03830___yc 551 AGAAAACCGCTGAAAAGCTTAACAAAAACGGTCTCGTCATCATGGCGAAC 600
BSNT_00677___ 601 GACGGGAAGATCAGCGCATTCGGTCCTAAATCAAGATACGGCCTGATCCA 650
||.||.||.||||||||.|||||.||||||||||||||||||||||||||
BSU03830___yc 601 GATGGAAAAATCAGCGCGTTCGGCCCTAAATCAAGATACGGCCTGATCCA 650
BSNT_00677___ 651 TGACGTGTTCGGCGTGACACCGGCTGATAAAAACATCAAAGCGTCTACTC 700
||||||.|||||||||.|.|||||||||.|||||||||||||||||||.|
BSU03830___yc 651 TGACGTATTCGGCGTGGCTCCGGCTGATCAAAACATCAAAGCGTCTACGC 700
BSNT_00677___ 701 ACGGACAAAGCGTTTCTTACGAGTACATTTCAAAAACAAACCCGGATTAC 750
||||||||||.||||||||||||||||||||||||||||||||.||||||
BSU03830___yc 701 ACGGACAAAGTGTTTCTTACGAGTACATTTCAAAAACAAACCCTGATTAC 750
BSNT_00677___ 751 CTGTTTGTCATTGACCGCGGTACAGCGATCGGTGAAACATCATCTACTAA 800
.|||||||.|||||||||||||||||.|||||.||||||||||||||.||
BSU03830___yc 751 TTGTTTGTTATTGACCGCGGTACAGCAATCGGAGAAACATCATCTACAAA 800
BSNT_00677___ 801 ACAAGTCGTTGAAAATGATTATGTGAAAAATGTAAACGCAGTGAAAAATG 850
|||||||||.|||||.||||||||||||||.|||||||||||||||||||
BSU03830___yc 801 ACAAGTCGTGGAAAACGATTATGTGAAAAACGTAAACGCAGTGAAAAATG 850
BSNT_00677___ 851 ATCATGTCGTCTACCTTGATTCTGCTACTTGGTACTTATCAGGAGGCGGT 900
.|||||||.|||||||||||||||||||||||||.||||||||||||||.
BSU03830___yc 851 GTCATGTCATCTACCTTGATTCTGCTACTTGGTATTTATCAGGAGGCGGA 900
BSNT_00677___ 901 CTTGAGTCTATGGCACAAATGATCAAAGAAGTGAAAGACGGTTTAGAGAA 950
||||||||||||.|.||||||||.|||||||||||||||||||||||.||
BSU03830___yc 901 CTTGAGTCTATGACGCAAATGATTAAAGAAGTGAAAGACGGTTTAGAAAA 950
BSNT_00677___ 951 GTAA 954
||||
BSU03830___yc 951 GTAA 954
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