Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00676 and BSU03820

See Amino acid alignment / Visit BSNT_00676 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:58
# Commandline: needle
#    -asequence dna-align/BSNT_00676___yclP.1.22522.seq
#    -bsequence dna-align/BSU03820___yclP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00676___yclP-BSU03820___yclP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00676___yclP-BSU03820___yclP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00676___yclP
# 2: BSU03820___yclP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity:     749/759 (98.7%)
# Similarity:   749/759 (98.7%)
# Gaps:           0/759 ( 0.0%)
# Score: 3705.0
# 
#
#=======================================

BSNT_00676___      1 ATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc      1 ATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCT     50

BSNT_00676___     51 TGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc     51 TGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCG    100

BSNT_00676___    101 GTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    101 GTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTG    150

BSNT_00676___    151 ATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    151 ATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGC    200

BSNT_00676___    201 ATGTGACAGTAAAGAGCTTGCCAAGAAAATGAGCATTTTGAAGCAGGCGA    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    201 ATGTGACAGCAAAGAGCTTGCCAAGAAAATGAGCATTTTGAAGCAGGCGA    250

BSNT_00676___    251 ACCAAATCAATATCAGGCTCACGATCAAAGACCTCGTCAGTTTTGGCAGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    251 ACCAAATCAATATCAGGCTCACGATCAAAGACCTCGTCAGTTTTGGCAGG    300

BSNT_00676___    301 TTTCCGTACTCACAGGGCCGGCTGACAGAGGAAGACTGGGTTCATATCAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    301 TTTCCGTACTCACAGGGCCGGCTGACAGAGGAAGACTGGGTTCATATCAA    350

BSNT_00676___    351 CCAGGCGCTCAGCTATATGAAGCTGGAAGACATTCAAGACAAATACTTGG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    351 CCAGGCGCTTAGCTATATGAAGCTGGAAGACATTCAAGACAAATACTTGG    400

BSNT_00676___    401 ATCAGCTGAGCGGCGGACAGTGCCAAAGGGCATTTATCGCCATGGTCATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    401 ATCAGCTGAGCGGCGGACAGTGCCAAAGGGCATTTATCGCCATGGTCATT    450

BSNT_00676___    451 GCCCAGGACACAGATTATATTTTTCTGGATGAGCCGCTGAACAATCTGGA    500
                     ||||||||||||||||||||.|||||||||||.|||||||||||||||||
BSU03820___yc    451 GCCCAGGACACAGATTATATCTTTCTGGATGAACCGCTGAACAATCTGGA    500

BSNT_00676___    501 TATGAAACACTCAGTTGAAATTATGAAACTGCTGAAACGGCTGGTAGAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    501 TATGAAACACTCAGTTGAAATTATGAAACTGCTGAAACGGCTGGTAGAGG    550

BSNT_00676___    551 AGCTTGGAAAAACGATCGTCATCGTTATTCACGATATCAATTTTGCTTCA    600
                     |||||||||||||||||||.|||||.||||||||||||||||||||||||
BSU03820___yc    551 AGCTTGGAAAAACGATCGTGATCGTCATTCACGATATCAATTTTGCTTCA    600

BSNT_00676___    601 GTCTATTCTGACCATATCGTCGCTTTGAAAAACGGCCGAATCGTAAAAGA    650
                     ||||||||||||.|||||||||||||||||||||||||||||||.|||||
BSU03820___yc    601 GTCTATTCTGACTATATCGTCGCTTTGAAAAACGGCCGAATCGTTAAAGA    650

BSNT_00676___    651 AGGACCACCTGAAGAAATGATAGAAACATCAGTGCTTGAGGAAATCTACG    700
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU03820___yc    651 AGGACCGCCTGAAGAAATGATAGAAACATCAGTGCTTGAGGAAATCTACG    700

BSNT_00676___    701 ATATGACCATCCCGATTCAGACGATTGATAATCAAAGAATAGGTGTCTAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03820___yc    701 ATATGACCATCCCGATTCAGACGATTGATAATCAAAGAATAGGTGTTTAT    750

BSNT_00676___    751 TTTTCTTAA    759
                     |||||||||
BSU03820___yc    751 TTTTCTTAA    759


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