Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00675 and BSU03810

See Amino acid alignment / Visit BSNT_00675 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:58
# Commandline: needle
#    -asequence dna-align/BSNT_00675___yclO.1.22522.seq
#    -bsequence dna-align/BSU03810___yclO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00675___yclO-BSU03810___yclO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00675___yclO-BSU03810___yclO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00675___yclO
# 2: BSU03810___yclO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity:     939/948 (99.1%)
# Similarity:   939/948 (99.1%)
# Gaps:           0/948 ( 0.0%)
# Score: 4659.0
# 
#
#=======================================

BSNT_00675___      1 ATGCGTAACCAGATGAAAATAGCTTTGCTCGTTGTTTTAGCCATTGTATG     50
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU03810___yc      1 ATGCGTAACCAGATGAAAATAGCTTTGCTCGTTGGTTTAGCCATTGTATG     50

BSNT_00675___     51 TATCGGCTTGTTTTTGTTTTATGACTTAGGCAATTGGGATTACACCCTGC    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc     51 TATTGGCTTGTTTTTGTTTTATGACTTAGGCAATTGGGATTACACCCTGC    100

BSNT_00675___    101 CGAGACGAATCAAAAAAGTCGCTGCCATTGTGCTGACGGGGGGAGCGATT    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU03810___yc    101 CGAGACGAATCAAAAAAGTCGCTGCCATTGTGCTGACTGGGGGAGCGATT    150

BSNT_00675___    151 GCGTTTTCGACCATGATCTTTCAAACGATTACGAACAACCGCATCCTGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    151 GCGTTTTCGACCATGATCTTTCAAACGATTACGAACAACCGCATCCTGAC    200

BSNT_00675___    201 GCCGAGCATTTTGGGCCTTGATTCTCTCTACATGCTGATTCAGACTGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    201 GCCGAGCATTTTGGGCCTTGATTCTCTCTACATGCTGATTCAGACTGGCA    250

BSNT_00675___    251 TTATCTTTTTGTTCGGTTCTGCGAATATGGTCATCATGAATAAAAACATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    251 TTATCTTTTTGTTCGGTTCTGCGAATATGGTCATCATGAATAAAAACATC    300

BSNT_00675___    301 AACTTTATCATCTCTGTTCTGCTGATGATCCTGTTTTCTCTTGTTTTGTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    301 AACTTTATCATCTCTGTTCTGCTGATGATCCTGTTTTCTCTTGTTTTGTA    350

BSNT_00675___    351 TCAGATCATGTTCAAGGGTGAGGGGAGAAATATCTTTTTCCTTCTGCTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    351 TCAGATCATGTTCAAGGGTGAGGGGAGAAATATCTTTTTCCTTCTGCTTA    400

BSNT_00675___    401 TCGGAATCGTGTTTGGCACGCTGTTCAGCAGCCTGTCTTCCTTTATGCAG    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU03810___yc    401 TCGGAATCGTGTTTGGCACGCTGTTCAGCAGCCTGTCTTCTTTTATGCAG    450

BSNT_00675___    451 ATGCTGATTGATCCGAATGAGTTCCAAGTGGTGCAGGACAAGATGTTTGC    500
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU03810___yc    451 ATGCTGATTGATCCGAACGAGTTCCAAGTTGTGCAGGACAAGATGTTTGC    500

BSNT_00675___    501 CAGCTTTAACAACATCAATACAGATTTGTTATGGCTCGCGTTCATCATCT    550
                     ||||||||||||.||||||||.||||||||||||||||||||||||||||
BSU03810___yc    501 CAGCTTTAACAATATCAATACGGATTTGTTATGGCTCGCGTTCATCATCT    550

BSNT_00675___    551 TCCTGCTGACAGGCGTTTATGTCTGGCGTTTTACAAAGTTTTTCGATGTG    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU03810___yc    551 TCCTGCTGACAGGCGTTTATGTCTGGCGTTTTACAAAATTTTTCGATGTG    600

BSNT_00675___    601 CTGTCGCTCGGACGCGAGCACGCCGTGAATTTGGGCATTGACTACGACAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    601 CTGTCGCTCGGACGCGAGCACGCCGTGAATTTGGGCATTGACTACGACAA    650

BSNT_00675___    651 AGTGGTGAAGCAGATGCTGATCGTGGTTGCGATTTTGGTTTCTGTTTCAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    651 AGTGGTGAAGCAGATGCTGATCGTGGTTGCGATTTTGGTTTCTGTTTCAA    700

BSNT_00675___    701 CAGCGCTAGTCGGGCCGATTATGTTTTTAGGCCTTCTGGTCGTCAACCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    701 CAGCGCTAGTCGGGCCGATTATGTTTTTAGGCCTTCTGGTCGTCAACCTG    750

BSNT_00675___    751 GCGAGAGAATTCCTGAAAACATATAAGCATTCATACTTAATCGCAGGCTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    751 GCGAGAGAATTCCTGAAAACATATAAGCATTCATACTTAATCGCAGGCTC    800

BSNT_00675___    801 CGTTTTCATCAGCATCATTGCGCTGGTCGGAGGGCAGTTTGTGGTTGAGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    801 CGTTTTCATCAGCATCATTGCGCTGGTCGGAGGGCAGTTTGTGGTTGAGA    850

BSNT_00675___    851 AAGTGTTTACCTTCTCAACGACGCTGAGCGTCATTATTAATTTTGCCGGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    851 AAGTGTTTACCTTCTCAACGACGCTGAGCGTCATTATTAATTTTGCCGGC    900

BSNT_00675___    901 GGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAG    948
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU03810___yc    901 GGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAG    948


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.