Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00662 and BSU03720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:57
# Commandline: needle
# -asequence dna-align/BSNT_00662___gerKB.1.22522.seq
# -bsequence dna-align/BSU03720___gerKB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00662___gerKB-BSU03720___gerKB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00662___gerKB-BSU03720___gerKB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00662___gerKB
# 2: BSU03720___gerKB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1123
# Identity: 1086/1123 (96.7%)
# Similarity: 1086/1123 (96.7%)
# Gaps: 2/1123 ( 0.2%)
# Score: 5270.0
#
#
#=======================================
BSNT_00662___ 1 ATGGAAAAAGCCAGAATAAGCATAAGGCAGCTGTTTGTCATGATTATCAT 50
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU03720___ge 1 ATGGAAAAAGCCAGAATAAGCATAAGGCAGTTGTTTGTCATGATTATCAT 50
BSNT_00662___ 51 TTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAATGGCGGGCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 51 TTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAATGGCGGGCA 100
BSNT_00662___ 101 GGGATGCTTGGATAGCAGTTTTATTAGGCTGTGCGATCGGACTGTTTCTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 101 GGGATGCTTGGATAGCAGTTTTATTAGGCTGTGCGATCGGACTGTTTCTT 150
BSNT_00662___ 151 TTCTGTTTGTATCAAGGCATTTATCAATGTTATCCGAATTCTTCTCCGAA 200
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 151 TTCTATTTGTATCAAGGCATTTATCAATGTTATCCGAATTCTTCTCCGAA 200
BSNT_00662___ 201 AGAATATATGGATGATATGCTGGGAACCAAGCTGAGCTGGCTGTTTTCAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 201 AGAATATATGGATGATATGCTGGGAACCAAGCTGAGCTGGCTGTTTTCAT 250
BSNT_00662___ 251 TTCTCTATATATTGTACTTTGCCTATAATGCCGCAAGGGTGCTGCGTGAC 300
||||||||||.||||||||||||||||.||||||||||||||||||||||
BSU03720___ge 251 TTCTCTATATCTTGTACTTTGCCTATATTGCCGCAAGGGTGCTGCGTGAC 300
BSNT_00662___ 301 TTTGGAGAAATGCTGCTGACGTTTGCTTATCATGATACACCTATCATTAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 301 TTTGGAGAAATGCTGCTGACGTTTGCTTATCATGATACACCTATCATTAT 350
BSNT_00662___ 351 TGTAAATGCTTTATTAATGGTAGTAAGCATATATGCCGTAAGAAAAGGAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 351 TGTAAATGCTTTATTAATGGTAGTAAGCATATATGCCGTAAGAAAAGGAA 400
BSNT_00662___ 401 TTGAAGTACTCGCACGCGCTGCCGAACTTCTTTTCGGGGTCATGTATTTA 450
|||||||||||||||||||.|||||||||||||||||||.||||||||||
BSU03720___ge 401 TTGAAGTACTCGCACGCGCGGCCGAACTTCTTTTCGGGGCCATGTATTTA 450
BSNT_00662___ 451 CTGGGCGCGATCGGGCTCGTGCTGATTATTGTCTCAGGCACTATAGACCC 500
||||||||||||||.||.||||||||||||||||||||.|||||||||||
BSU03720___ge 451 CTGGGCGCGATCGGCCTTGTGCTGATTATTGTCTCAGGGACTATAGACCC 500
BSNT_00662___ 501 GCACAATTTAAAGCCGGTTTTGGCAAACGGTATTTCTCCTATCCTTCACT 550
||||||||||||||||||||||||||||||.|||||||||.|||||||||
BSU03720___ge 501 GCACAATTTAAAGCCGGTTTTGGCAAACGGCATTTCTCCTGTCCTTCACT 550
BSNT_00662___ 551 CTGTTTTCACGCAGACCATGTACGTCCCATTTGGTGAAGTCGTTTTATTT 600
||||||||||.||||||||||||||.||||||||||||||.|||||||||
BSU03720___ge 551 CTGTTTTCACACAGACCATGTACGTTCCATTTGGTGAAGTTGTTTTATTT 600
BSNT_00662___ 601 GTGATGATTTTCCCTATCCTGAATAACAGAAAAGATGTAAAAAAAATGGG 650
||||||||||||||||.|||||||.|||||||||||||.|||||||||||
BSU03720___ge 601 GTGATGATTTTCCCTAACCTGAATGACAGAAAAGATGTGAAAAAAATGGG 650
BSNT_00662___ 651 GATGATTGCCATGGCTATTAGCGGATTGGTTGTGGCGCTCACCGTGGCGA 700
||||||.|||||||||||||||||||||.|||||||||||||||||||||
BSU03720___ge 651 GATGATCGCCATGGCTATTAGCGGATTGATTGTGGCGCTCACCGTGGCGA 700
BSNT_00662___ 701 TTAATATCAGCGTGCTTGATGTTGATCTTACACTCAGATCCCAGTTCCCG 750
|||||||.||||||||||||||||||||||||||||||||||||||.|||
BSU03720___ge 701 TTAATATTAGCGTGCTTGATGTTGATCTTACACTCAGATCCCAGTTTCCG 750
BSNT_00662___ 751 CTTTTAAGTACGATCCAGACAATCAAGGTCGAAGAATTTTTAGACCGGCT 800
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 751 CTTTTAAGCACGATCCAGACAATCAAGGTCGAAGAATTTTTAGACCGGCT 800
BSNT_00662___ 801 CGATGTCTTTTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTTA 850
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU03720___ge 801 CGATGTCTTTTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTCA 850
BSNT_00662___ 851 GCCTCTACTTATATGCCACTGTGGTTGGGACATCTACGCTCTTTAAGGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 851 GCCTCTACTTATATGCCACTGTGGTTGGGACATCTACGCTCTTTAAGGAA 900
BSNT_00662___ 901 AAGAATCTCTCTCAATTGGCTTATCCGATGGGATTGGGCATCTTAATCCT 950
|||||.|.||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 901 AAGAACCCCTCTCAATTGGCTTATCCGATGGGATTGGGCATCTTAATCCT 950
BSNT_00662___ 951 TTCTTTAACGATCGCAACTAACTTTTCAGAGCACTTGAACGAAGGCTTGA 1000
||||.||||||||||.|||||||||||.|||||||||||.||||||.|||
BSU03720___ge 951 TTCTATAACGATCGCGACTAACTTTTCGGAGCACTTGAATGAAGGCCTGA 1000
BSNT_00662___ 1001 ACGTGGTGCCGCTGTATATTCATTTGCCTTTTCAATTATTGTTTCCGCTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge 1001 ACGTGGTGCCGCTGTATATTCATTTGCCTTTTCAATTATTGTTTCCGCTC 1050
BSNT_00662___ 1051 TTTCTGTTTATTGTGGCTGTTTGGAAAAAGAAACGAAGAGAGAAGTCAAA 1100
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU03720___ge 1051 TTTCTGTTTATTGTGGCCGTTTGGAAAAAGAAACGAAGAGAGAAGTCAAA 1100
BSNT_00662___ 1101 AGGGACAGGAA-TAAAGGAATGA 1122
|||| .||||| .|||..|||||
BSU03720___ge 1101 AGGG-GAGGAAGCAAAAAAATGA 1122
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