Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00650 and BSU03652
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:55
# Commandline: needle
# -asequence dna-align/BSNT_00650.1.22522.seq
# -bsequence dna-align/BSU03652___yclD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00650-BSU03652___yclD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00650-BSU03652___yclD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00650
# 2: BSU03652___yclD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 248/465 (53.3%)
# Similarity: 248/465 (53.3%)
# Gaps: 213/465 (45.8%)
# Score: 1214.0
#
#
#=======================================
BSNT_00650 1 ------------------ATGTCAGACCGTCTCTTTGAGCTGCTTGACGG 32
||||||||||||||||||||||||||||||||
BSU03652___yc 1 TTGATCCGCGTGAACTGTATGTCAGACCGTCTCTTTGAGCTGCTTGACGG 50
BSNT_00650 33 GAGCTGCCTGAATGAGAAGCAGCATGAGGCCTTCGTTCTGCAAACAGTAT 82
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03652___yc 51 GAGCTGCCTGAATGAGAAGCAGCATGAGGCCTTCGTTCTGCAAACAGTAT 100
BSNT_00650 83 CAGAGGATGGCTGGCCGCATGCCGCTATGATCAGTGCAGGTGAAATTATC 132
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03652___yc 101 CAGAGGATGGCTGGCCGCATGCCGCTATGATCAGTGCAGGTGAAATCATC 150
BSNT_00650 133 GCGCTGAGCCGAACTGATATCCGAATCGCTCTGTGGAAAAACACAATGAC 182
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03652___yc 151 GCGCTGAGCCGAACTGATATCCGAATCGCTCTGTGGAAAAACACAATGAC 200
BSNT_00650 183 TTCGGCCAACATCCTTCGCACAGGAACAGCACAGTTCACGGCATGGTGGA 232
||||||||||||||||||||||||||.|||||||||||||||.|||||||
BSU03652___yc 201 TTCGGCCAACATCCTTCGCACAGGAAAAGCACAGTTCACGGCGTGGTGGA 250
BSNT_00650 233 AGGGAGCAG-CTATTATGTAA----------------------------- 252
|||||||.| |||||||||||
BSU03652___yc 251 AGGGAGCGGCCTATTATGTAAAGCTTGAATGCGCGCCTTTACCGCCTTTG 300
BSNT_00650 252 -------------------------------------------------- 252
BSU03652___yc 301 AAAGATGCCGAATATGAAAGAGACCGTTTTTCCTGCCGCATCGTTTCAGT 350
BSNT_00650 252 -------------------------------------------------- 252
BSU03652___yc 351 GAAAGAGGACGTTGCGAAATACGCTGATTTGACTTCAGGTGTCCGTATAC 400
BSNT_00650 252 -------------------------------------------------- 252
BSU03652___yc 401 AGCTTCACAGCCCTGAAGAGGTGCTGAGCAGATGGAAAAAGACCCTGGAA 450
BSNT_00650 252 --------------- 252
BSU03652___yc 451 GATTTAAAACGGTAA 465
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