Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00648 and BSU03651

See Amino acid alignment / Visit BSNT_00648 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:55
# Commandline: needle
#    -asequence dna-align/BSNT_00648.1.22522.seq
#    -bsequence dna-align/BSU03651___bsdD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00648-BSU03651___bsdD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00648-BSU03651___bsdD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00648
# 2: BSU03651___bsdD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity:     185/228 (81.1%)
# Similarity:   185/228 (81.1%)
# Gaps:          42/228 (18.4%)
# Score: 921.0
# 
#
#=======================================

BSNT_00648         1 ------------------------------------------ATGAGCAA      8
                                                               ||||||||
BSU03651___bs      1 ATGCATACATGTCCTCGATGCGACTCAAAAAAGGGAGAAGTCATGAGCAA     50

BSNT_00648         9 ATCGCCTGTAGAAGGCGCATGGGAAGTTTATCAGTGCCAAACATGCTTTT     58
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03651___bs     51 ATCGCCTGTAGAAGGCGCATGGGAAGTTTATCAGTGCCAAACATGCTTTT    100

BSNT_00648        59 TTACATGGAGATCCTGTGAACCGGAAAGCATTACAAATCCCAAAAAATAC    108
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU03651___bs    101 TTACATGGAGATCCTGTGAACCGGAAAGCATTACAAATCCCGAAAAATAC    150

BSNT_00648       109 AATCCAGCGTTTAAAATTGATCCAAAGGAAACAGAAACAGCAATTGAAGT    158
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03651___bs    151 AATCCAGCGTTTAAAATTGATCCAAAGGAAACAGAAACAGCAATTGAAGT    200

BSNT_00648       159 TCCGGCGGTGCCGGAACGAAAGGCTTGA    186
                     ||||||||||||||||||||||||||||
BSU03651___bs    201 TCCGGCGGTGCCGGAACGAAAGGCTTGA    228


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