Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00643 and BSU03620

See Amino acid alignment / Visit BSNT_00643 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:54
# Commandline: needle
#    -asequence dna-align/BSNT_00643___yclA.1.22522.seq
#    -bsequence dna-align/BSU03620___yclA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00643___yclA-BSU03620___yclA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00643___yclA-BSU03620___yclA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00643___yclA
# 2: BSU03620___yclA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     866/873 (99.2%)
# Similarity:   866/873 (99.2%)
# Gaps:           0/873 ( 0.0%)
# Score: 4302.0
# 
#
#=======================================

BSNT_00643___      1 TTGGATATTCGCCAGCCTCGATACTTCATTACCATTGCCCAAGAACAGAA     50
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU03620___yc      1 TTGGATATTCGCCAGCTTCGATACTTCATTACCATTGCCCAAGAACAGAA     50

BSNT_00643___     51 AATTACGTCCGCAGCCAAAAAGCTTCACATGGCGCAGCCGCCTTTAAGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc     51 AATTACGTCCGCAGCCAAAAAGCTTCACATGGCGCAGCCGCCTTTAAGCA    100

BSNT_00643___    101 GGCAGCTCAAACAGCTGGAGGACGAGCTTGGTGTTGTTCTGTTTGACCGG    150
                     |||||||||||||||||||||||||.|||||||||||||||||||||||.
BSU03620___yc    101 GGCAGCTCAAACAGCTGGAGGACGAACTTGGTGTTGTTCTGTTTGACCGT    150

BSNT_00643___    151 AACAAGAAAAAACAAATGACTCTTACATATGAAGGAGCTGTTTTTCTAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    151 AACAAGAAAAAACAAATGACTCTTACATATGAAGGAGCTGTTTTTCTAAA    200

BSNT_00643___    201 AAGAGCAAAAGAGATTCTGCATAGGTTTGAAGATGCAGTCATTGAGGTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    201 AAGAGCAAAAGAGATTCTGCATAGGTTTGAAGATGCAGTCATTGAGGTAC    250

BSNT_00643___    251 AGGAGCTGAAGGAGGAAGTAGCCGGTACACTTGCCGTGGGATCAACGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    251 AGGAGCTGAAGGAGGAAGTAGCCGGTACACTTGCCGTGGGATCAACGATT    300

BSNT_00643___    301 TATTGCGCGGCTCTGATGCTTGAAAAAGTAACACAGATCAAAGAGAGATA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    301 TATTGCGCGGCTCTGATGCTTGAAAAAGTAACACAGATCAAAGAGAGATA    350

BSNT_00643___    351 CCCCCATCTCACCTTTAATATTTGGGAAAATGAGCCCGCGACACTGTTAG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||.|
BSU03620___yc    351 CCCCCATCTCACCTTTAATATTTGGGAAAATGAACCCGCGACACTGTTGG    400

BSNT_00643___    401 AGCTGCTGGAAAGCCGGCAAATCGATGCGGCGGTCACGACAACACTGATC    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    401 AACTGCTGGAAAGCCGGCAAATCGATGCGGCGGTCACGACAACACTGATC    450

BSNT_00643___    451 AAAAGTGACACAGTACAATTCAAGCAGCTTGATGACATTCCATGTGTGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    451 AAAAGTGACACAGTACAATTCAAGCAGCTTGATGACATTCCATGTGTGCT    500

BSNT_00643___    501 CGTGCTTTCAGATGAAGCCGGATATCCGTGCGGAGACACCATTAAGATGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    501 CGTGCTTTCAGATGAAGCCGGATATCCGTGCGGAGACACCATTAAGATGG    550

BSNT_00643___    551 AGGACATTCCTTCATTTCCGCTGATCCTGCTGCGGCCTGTCAACGGAAAA    600
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    551 TGGACATTCCTTCATTTCCGCTGATCCTGCTGCGGCCTGTCAACGGAAAA    600

BSNT_00643___    601 GGCGTCTATAATCAGGTCATGAATGAATTTCATCGTTTGAACCTGGAGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    601 GGCGTCTATAATCAGGTCATGAATGAATTTCATCGTTTGAACCTGGAGCC    650

BSNT_00643___    651 GCGCATTGTTTGTGAATGCCACGACTCTGCAACTTTGCTCAGCCTCGTGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    651 GCGCATTGTTTGTGAATGCCACGACTCTGCAACTTTGCTCAGCCTCGTGT    700

BSNT_00643___    701 CATCCGGATTCGGCGCGTCTATTTTGCCTGTCACAATGATTCCCGTTCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    701 CATCCGGATTCGGCGCGTCTATTTTGCCTGTCACAATGATTCCCGTTCAT    750

BSNT_00643___    751 ATGAGAAATCACGTTCACACCGTCCATATCGAAAATAATCCCTTCATTAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    751 ATGAGAAATCACGTTCACACCGTCCATATCGAAAATAATCCCTTCATTAT    800

BSNT_00643___    801 GACACCGGCTGTCATGTGGAGAACGGACAGTTATTTGCCTAAACCGGCAC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03620___yc    801 GACACCGGCTGTCATGTGGAGAACGGACAGTTATTTGCCTAAACCGGCAC    850

BSNT_00643___    851 AGCAATTTTTGGATTTATTTTAA    873
                     |||||||||||||||||||||||
BSU03620___yc    851 AGCAATTTTTGGATTTATTTTAA    873


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