Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00633 and BSU03560

See Amino acid alignment / Visit BSNT_00633 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:54
# Commandline: needle
#    -asequence dna-align/BSNT_00633___ycxD.1.22522.seq
#    -bsequence dna-align/BSU03560___ycxD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00633___ycxD-BSU03560___ycxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00633___ycxD-BSU03560___ycxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: BSU03560___ycxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity:    1312/1335 (98.3%)
# Similarity:  1312/1335 (98.3%)
# Gaps:           0/1335 ( 0.0%)
# Score: 6468.0
# 
#
#=======================================

BSNT_00633___      1 ATGGAGAAATATATGAGTCTATTAATGAGGATAGAGGAGATGATGCAAAG     50
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03560___yc      1 ATGGAGAAATATATGAGTCTATTAACGAGGATAGAGGAGATGATGCAAAG     50

BSNT_00633___     51 CACCGCCTATCAAGAAGGAGACAGGCTTCCATCTATCCGTCAGCTGTCCG    100
                     ||||.|.|||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc     51 CACCTCATATCAAGAAGGAGACAGGCTTCCATCTATCCGTCAGCTGTCCG    100

BSNT_00633___    101 CCCGCTACCAAGTCAGCAAAAGCACAGTGATCCGCGCGCTGCAGGAGCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    101 CCCGCTACCAAGTCAGCAAAAGCACAGTGATCCGCGCGCTGCAGGAGCTG    150

BSNT_00633___    151 GAAAAGCGCCACCTTATCTATTCTGTTCCGAAAAGCGGCTATTATATTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    151 GAAAAGCGCCACCTTATCTATTCTGTTCCGAAAAGCGGCTATTATATTGT    200

BSNT_00633___    201 GAAAAAGACAGGGAAATCAAGAAGCGGGCAGCCTGGCCCCATCGACTTTG    250
                     |||||||.||||||||||||.|||||||||||||||||||||||||||||
BSU03560___yc    201 GAAAAAGTCAGGGAAATCAAAAAGCGGGCAGCCTGGCCCCATCGACTTTG    250

BSNT_00633___    251 CCACATCTGCGCCGGATCCAGATGTGTTTCCGTATCTTGATTTTCAGCAC    300
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU03560___yc    251 CCACATCTGCGCCGGATCCCGATGTGTTTCCGTATCTTGATTTTCAGCAC    300

BSNT_00633___    301 TGTATCAACAAAGCGATTGATACATACAAAAACGATTTGTTTATTTATGG    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    301 TGCATCAACAAAGCGATTGATACATACAAAAACGATTTGTTTATTTATGG    350

BSNT_00633___    351 GACGCCAAAGGGGCTTCCCTCACTCATCCGCGTACTCCGAAAGCTCTTGG    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03560___yc    351 GACGCCAAAGGGGCTTCCATCACTCATCCGCGTACTCCGAAAGCTCTTGG    400

BSNT_00633___    401 CCACTCAACAGGTATTTGCGGATGAACGGCATATTTTCATTACATCAGGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    401 CCACTCAACAGGTATTTGCGGATGAACGGCATATTTTCATTACATCAGGT    450

BSNT_00633___    451 GTCCAGCAGGCGTTATCCTTGCTTTGTGCCATGCCGTTCCCAAATGGGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    451 GTCCAGCAGGCGTTATCCTTGCTTTGTGCCATGCCGTTCCCAAATGGGAA    500

BSNT_00633___    501 AGAGAAGATCGCCATTGAACAGCCGGGCTACCATTTGATGGTCGAACAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    501 AGAGAAGATCGCCATTGAACAGCCGGGCTACCATTTGATGGTCGAACAGC    550

BSNT_00633___    551 TTGAGACGCTTGGGATTCCCGCTATCGGGGTGAAACGAACGGAAGAAGGG    600
                     |||||||.||||||||||||||.|||||||||||||||||||||||||||
BSU03560___yc    551 TTGAGACACTTGGGATTCCCGCCATCGGGGTGAAACGAACGGAAGAAGGG    600

BSNT_00633___    601 CTTGATATAGCCGAGGTTGAGCGGTTATTTCAAACAGAATCGATTAAATT    650
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03560___yc    601 CTTGATATAGCCAAGGTTGAGCGGTTATTTCAAACAGAATCGATTAAATT    650

BSNT_00633___    651 TTTTTATACGATGCCGCGCTTCCATAACCCGCTTGGCTACTCATTGTCAG    700
                     ||||||||||||||||||||||||||||||||||||.|.|||||||||||
BSU03560___yc    651 TTTTTATACGATGCCGCGCTTCCATAACCCGCTTGGGTGCTCATTGTCAG    700

BSNT_00633___    701 AGCGTGATAAACAGGAGCTTGTGAGACTGGCAGAAGCGTATGATGTCTAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    701 AGCGTGATAAACAGGAGCTTGTGAGACTGGCAGAAGCGTATGATGTCTAT    750

BSNT_00633___    751 CTCGTTGAGGATGATTACCTCGGTGATCTGGAGGAAAATAAAAAGGCAGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    751 CTCGTTGAGGATGATTACCTCGGTGATCTGGAGGAAAATAAAAAGGCAGA    800

BSNT_00633___    801 TCCGCTGTACGCATATGATCTGTCCTCACATGTCATCTATTTGAAAAGCT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    801 TCCGCTGTACGCATATGATCTGTCCTCACATGTCATCTATTTGAAAAGCT    850

BSNT_00633___    851 TCTCGAAAATGATGTTCCCCGGCCTTCGCGTGGGGGCGGCTGTTTTGCCC    900
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03560___yc    851 TCTCGAAAATGATGTTCCCCGGCCTCCGCGTGGGGGCGGCTGTTTTGCCC    900

BSNT_00633___    901 GAAGCGCTGACTGACACGTTCTATGCGTACAAAAAGCTGAACGACATCGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    901 GAAGCGCTGACTGACACGTTCTATGCGTACAAAAAGCTGAACGACATCGA    950

BSNT_00633___    951 CTGTTCGATGATTTCTCAAGCGGCATTGGAGATTTACCTGAAAAGCGGTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc    951 CTGTTCGATGATTTCTCAAGCGGCATTGGAGATTTACCTGAAAAGCGGTA   1000

BSNT_00633___   1001 TGTACGGCAGGCATAAGGAGAAAATCAGAGATTCTTATAAAGAGCGGTCG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc   1001 TGTACGGCAGGCATAAGGAGAAAATCAGAGATTCTTATAAAGAGCGGTCG   1050

BSNT_00633___   1051 CTGAAGCTTCATCAAGCCATTCAAACACACAGGCAGCTGGGAAGCGGCCG   1100
                     ||||.|||.|||||||||||||.|||.||||||||||||||||||||.||
BSU03560___yc   1051 CTGAGGCTACATCAAGCCATTCGAACTCACAGGCAGCTGGGAAGCGGACG   1100

BSNT_00633___   1101 CTTTACGTTCTCCAGCGGGCAGGCACCCTGCATGCACACCCACCTGGTGC   1150
                     ||||||||||||||||||||||||||||||.|||||||||||.|||||||
BSU03560___yc   1101 CTTTACGTTCTCCAGCGGGCAGGCACCCTGTATGCACACCCATCTGGTGC   1150

BSNT_00633___   1151 TTCCTCAGGATCTGCCCGCCTCAAGAGTGATTCATAGACTGAAAAAACAA   1200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU03560___yc   1151 TTCCTCAGGATCTGCCCGCCTCAAGAGTGATTCATAGACTGGAAAAACAA   1200

BSNT_00633___   1201 GGGGTTCTCCTTGAGGCGATAGACCGTCATTATTTATCAGATTATCAGAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03560___yc   1201 GGGGTTCTCCTTGAGGCGATAGACCGTCATTATTTATCAGATTATCCGAA   1250

BSNT_00633___   1251 AGAAAATCTATTAAAAATCAATATTTCCAATGTGAAAACGGAAGATATTG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc   1251 AGAAAATCTATTAAAAATCAATATTTCCAATGTGAAAACGGAAGATATTG   1300

BSNT_00633___   1301 AGCGCGGTGTCAAGCTGTTGATGAGCCATTTATAA   1335
                     |||||||||||||||||||||||||||||||||||
BSU03560___yc   1301 AGCGCGGTGTCAAGCTGTTGATGAGCCATTTATAA   1335


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