Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00633 and BSU03560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:54
# Commandline: needle
# -asequence dna-align/BSNT_00633___ycxD.1.22522.seq
# -bsequence dna-align/BSU03560___ycxD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00633___ycxD-BSU03560___ycxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00633___ycxD-BSU03560___ycxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: BSU03560___ycxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity: 1312/1335 (98.3%)
# Similarity: 1312/1335 (98.3%)
# Gaps: 0/1335 ( 0.0%)
# Score: 6468.0
#
#
#=======================================
BSNT_00633___ 1 ATGGAGAAATATATGAGTCTATTAATGAGGATAGAGGAGATGATGCAAAG 50
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03560___yc 1 ATGGAGAAATATATGAGTCTATTAACGAGGATAGAGGAGATGATGCAAAG 50
BSNT_00633___ 51 CACCGCCTATCAAGAAGGAGACAGGCTTCCATCTATCCGTCAGCTGTCCG 100
||||.|.|||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 51 CACCTCATATCAAGAAGGAGACAGGCTTCCATCTATCCGTCAGCTGTCCG 100
BSNT_00633___ 101 CCCGCTACCAAGTCAGCAAAAGCACAGTGATCCGCGCGCTGCAGGAGCTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 101 CCCGCTACCAAGTCAGCAAAAGCACAGTGATCCGCGCGCTGCAGGAGCTG 150
BSNT_00633___ 151 GAAAAGCGCCACCTTATCTATTCTGTTCCGAAAAGCGGCTATTATATTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 151 GAAAAGCGCCACCTTATCTATTCTGTTCCGAAAAGCGGCTATTATATTGT 200
BSNT_00633___ 201 GAAAAAGACAGGGAAATCAAGAAGCGGGCAGCCTGGCCCCATCGACTTTG 250
|||||||.||||||||||||.|||||||||||||||||||||||||||||
BSU03560___yc 201 GAAAAAGTCAGGGAAATCAAAAAGCGGGCAGCCTGGCCCCATCGACTTTG 250
BSNT_00633___ 251 CCACATCTGCGCCGGATCCAGATGTGTTTCCGTATCTTGATTTTCAGCAC 300
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU03560___yc 251 CCACATCTGCGCCGGATCCCGATGTGTTTCCGTATCTTGATTTTCAGCAC 300
BSNT_00633___ 301 TGTATCAACAAAGCGATTGATACATACAAAAACGATTTGTTTATTTATGG 350
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 301 TGCATCAACAAAGCGATTGATACATACAAAAACGATTTGTTTATTTATGG 350
BSNT_00633___ 351 GACGCCAAAGGGGCTTCCCTCACTCATCCGCGTACTCCGAAAGCTCTTGG 400
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03560___yc 351 GACGCCAAAGGGGCTTCCATCACTCATCCGCGTACTCCGAAAGCTCTTGG 400
BSNT_00633___ 401 CCACTCAACAGGTATTTGCGGATGAACGGCATATTTTCATTACATCAGGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 401 CCACTCAACAGGTATTTGCGGATGAACGGCATATTTTCATTACATCAGGT 450
BSNT_00633___ 451 GTCCAGCAGGCGTTATCCTTGCTTTGTGCCATGCCGTTCCCAAATGGGAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 451 GTCCAGCAGGCGTTATCCTTGCTTTGTGCCATGCCGTTCCCAAATGGGAA 500
BSNT_00633___ 501 AGAGAAGATCGCCATTGAACAGCCGGGCTACCATTTGATGGTCGAACAGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 501 AGAGAAGATCGCCATTGAACAGCCGGGCTACCATTTGATGGTCGAACAGC 550
BSNT_00633___ 551 TTGAGACGCTTGGGATTCCCGCTATCGGGGTGAAACGAACGGAAGAAGGG 600
|||||||.||||||||||||||.|||||||||||||||||||||||||||
BSU03560___yc 551 TTGAGACACTTGGGATTCCCGCCATCGGGGTGAAACGAACGGAAGAAGGG 600
BSNT_00633___ 601 CTTGATATAGCCGAGGTTGAGCGGTTATTTCAAACAGAATCGATTAAATT 650
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03560___yc 601 CTTGATATAGCCAAGGTTGAGCGGTTATTTCAAACAGAATCGATTAAATT 650
BSNT_00633___ 651 TTTTTATACGATGCCGCGCTTCCATAACCCGCTTGGCTACTCATTGTCAG 700
||||||||||||||||||||||||||||||||||||.|.|||||||||||
BSU03560___yc 651 TTTTTATACGATGCCGCGCTTCCATAACCCGCTTGGGTGCTCATTGTCAG 700
BSNT_00633___ 701 AGCGTGATAAACAGGAGCTTGTGAGACTGGCAGAAGCGTATGATGTCTAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 701 AGCGTGATAAACAGGAGCTTGTGAGACTGGCAGAAGCGTATGATGTCTAT 750
BSNT_00633___ 751 CTCGTTGAGGATGATTACCTCGGTGATCTGGAGGAAAATAAAAAGGCAGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 751 CTCGTTGAGGATGATTACCTCGGTGATCTGGAGGAAAATAAAAAGGCAGA 800
BSNT_00633___ 801 TCCGCTGTACGCATATGATCTGTCCTCACATGTCATCTATTTGAAAAGCT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 801 TCCGCTGTACGCATATGATCTGTCCTCACATGTCATCTATTTGAAAAGCT 850
BSNT_00633___ 851 TCTCGAAAATGATGTTCCCCGGCCTTCGCGTGGGGGCGGCTGTTTTGCCC 900
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03560___yc 851 TCTCGAAAATGATGTTCCCCGGCCTCCGCGTGGGGGCGGCTGTTTTGCCC 900
BSNT_00633___ 901 GAAGCGCTGACTGACACGTTCTATGCGTACAAAAAGCTGAACGACATCGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 901 GAAGCGCTGACTGACACGTTCTATGCGTACAAAAAGCTGAACGACATCGA 950
BSNT_00633___ 951 CTGTTCGATGATTTCTCAAGCGGCATTGGAGATTTACCTGAAAAGCGGTA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 951 CTGTTCGATGATTTCTCAAGCGGCATTGGAGATTTACCTGAAAAGCGGTA 1000
BSNT_00633___ 1001 TGTACGGCAGGCATAAGGAGAAAATCAGAGATTCTTATAAAGAGCGGTCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 1001 TGTACGGCAGGCATAAGGAGAAAATCAGAGATTCTTATAAAGAGCGGTCG 1050
BSNT_00633___ 1051 CTGAAGCTTCATCAAGCCATTCAAACACACAGGCAGCTGGGAAGCGGCCG 1100
||||.|||.|||||||||||||.|||.||||||||||||||||||||.||
BSU03560___yc 1051 CTGAGGCTACATCAAGCCATTCGAACTCACAGGCAGCTGGGAAGCGGACG 1100
BSNT_00633___ 1101 CTTTACGTTCTCCAGCGGGCAGGCACCCTGCATGCACACCCACCTGGTGC 1150
||||||||||||||||||||||||||||||.|||||||||||.|||||||
BSU03560___yc 1101 CTTTACGTTCTCCAGCGGGCAGGCACCCTGTATGCACACCCATCTGGTGC 1150
BSNT_00633___ 1151 TTCCTCAGGATCTGCCCGCCTCAAGAGTGATTCATAGACTGAAAAAACAA 1200
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU03560___yc 1151 TTCCTCAGGATCTGCCCGCCTCAAGAGTGATTCATAGACTGGAAAAACAA 1200
BSNT_00633___ 1201 GGGGTTCTCCTTGAGGCGATAGACCGTCATTATTTATCAGATTATCAGAA 1250
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03560___yc 1201 GGGGTTCTCCTTGAGGCGATAGACCGTCATTATTTATCAGATTATCCGAA 1250
BSNT_00633___ 1251 AGAAAATCTATTAAAAATCAATATTTCCAATGTGAAAACGGAAGATATTG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03560___yc 1251 AGAAAATCTATTAAAAATCAATATTTCCAATGTGAAAACGGAAGATATTG 1300
BSNT_00633___ 1301 AGCGCGGTGTCAAGCTGTTGATGAGCCATTTATAA 1335
|||||||||||||||||||||||||||||||||||
BSU03560___yc 1301 AGCGCGGTGTCAAGCTGTTGATGAGCCATTTATAA 1335
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