Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00628 and BSU03530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:53
# Commandline: needle
# -asequence dna-align/BSNT_00628___ycxA.1.22522.seq
# -bsequence dna-align/BSU03530___ycxA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00628___ycxA-BSU03530___ycxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00628___ycxA-BSU03530___ycxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00628___ycxA
# 2: BSU03530___ycxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1227
# Identity: 1198/1227 (97.6%)
# Similarity: 1198/1227 (97.6%)
# Gaps: 0/1227 ( 0.0%)
# Score: 5874.0
#
#
#=======================================
BSNT_00628___ 1 ATGCGCACGTCTCCCAGGATGAAATGGTTTGTATTGCTGTTTACGTTTGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 1 ATGCGCACGTCTCCCAGGATGAAATGGTTTGTATTGCTGTTTACGTTTGT 50
BSNT_00628___ 51 TTTCGCCATCGGAATGAACTCATTCAGAAATTCCTTTCAATTTTTTATGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 51 TTTCGCCATCGGAATGAACTCATTCAGAAATTCCTTTCAATTTTTTATGC 100
BSNT_00628___ 101 TGCCAATGGCGGATGCCTTCCATGCCGACAGGTCGCTGATTTCGGTTTCT 150
||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU03530___yc 101 TGCCAATGGCAGACGCCTTCCATGCCGACAGGTCGCTGATTTCGGTTTCT 150
BSNT_00628___ 151 GTCAGCATTTTTATGATCACAACCGGCATCGTCCAGTTTTTTGTCGGTTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 151 GTCAGCATTTTTATGATCACAACCGGCATCGTCCAGTTTTTTGTCGGTTT 200
BSNT_00628___ 201 TTTCATCGACCGTTTCAGTGTCAGAAAAATTATGGCGCTTGGAGCTGTCT 250
|||.|||||||||||||||||||||||||||||||||||.||||||||.|
BSU03530___yc 201 TTTTATCGACCGTTTCAGTGTCAGAAAAATTATGGCGCTGGGAGCTGTTT 250
BSNT_00628___ 251 GCATCAGCGCAAGCTTTTTGGTGCTTCCTTATTCACCGAATGTTCATGTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 251 GCATCAGCGCAAGCTTTTTGGTGCTTCCTTATTCACCGAATGTTCATGTG 300
BSNT_00628___ 301 TTTTCCGCCATTTACGGTGTGCTTGGCGGAATCGGATACTCCTGCGCGGT 350
|||||||||||||||||||||||||||||||||||.||.|||||||||||
BSU03530___yc 301 TTTTCCGCCATTTACGGTGTGCTTGGCGGAATCGGGTATTCCTGCGCGGT 350
BSNT_00628___ 351 CGGCGTGACGACCCAGTATTTCATCAGCCGTTGGTTTGACAGACACAAAG 400
||||||||||||||||||||||||||||.||||||||||||.||||||||
BSU03530___yc 351 CGGCGTGACGACCCAGTATTTCATCAGCTGTTGGTTTGACACACACAAAG 400
BSNT_00628___ 401 GTCTGGCGCTTGCTATTTTGACCAATGCCAACTCTGCGGGCCTGCTGCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 401 GTCTGGCGCTTGCTATTTTGACCAATGCCAACTCTGCGGGCCTGCTGCTT 450
BSNT_00628___ 451 CTCTCGCCCATTTGGGCTGCGGCTCCGTATCATGCCGGCTGGCAGAGCAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 451 CTCTCGCCCATTTGGGCTGCGGCTCCGTATCATGCCGGCTGGCAGAGCAC 500
BSNT_00628___ 501 CTATACGATTTTGGGAATCGTCATGGCGGCTGTTCTGCTGCCGCTCCTCG 550
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 501 CTATACCATTTTGGGAATCGTCATGGCGGCTGTTCTGCTGCCGCTCCTCG 550
BSNT_00628___ 551 TCATTGGGATGAAGCACCCGCCGTATGCGCAAGCGGAGTCTGTGAAAAAA 600
||.|||||||||||||||||||..|||||||||||||..|||||||||||
BSU03530___yc 551 TCTTTGGGATGAAGCACCCGCCACATGCGCAAGCGGAAACTGTGAAAAAA 600
BSNT_00628___ 601 TCTTATGATTGGCGGGGGTTTTGGAACGTGATGAAGCAATCCCGCCTCAT 650
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU03530___yc 601 TCTTATGATTGGCGAGGGTTTTGGAACGTGATGAAGCAATCCCGCCTCAT 650
BSNT_00628___ 651 TCATATCCTGTACTTCGGCGTGTGTACTTGCGGATTTACGATGGGAATCA 700
|||||||||||||||||||||||.|||||||||||||||.||||||||.|
BSU03530___yc 651 TCATATCCTGTACTTCGGCGTGTTTACTTGCGGATTTACAATGGGAATTA 700
BSNT_00628___ 701 TTGATGCTCATCTCGTTCCGATGCTGAAGGATGCACATGTCTCTCATGTC 750
||||||||||.|||||.|||||.|||||||||||.|||||||||||||||
BSU03530___yc 701 TTGATGCTCACCTCGTCCCGATACTGAAGGATGCGCATGTCTCTCATGTC 750
BSNT_00628___ 751 AACGGAATGATGGCCGCGTTCGGGGCGTTTATTATCATTGGCGGATTATT 800
||||||||||||||||||||||||||.|||||.|||||||||||||||||
BSU03530___yc 751 AACGGAATGATGGCCGCGTTCGGGGCATTTATCATCATTGGCGGATTATT 800
BSNT_00628___ 801 GGCAGGCTGGCTGTCCGATCTCCTCGGCAGCAGAAGCGTCATGCTATCCA 850
|||.|||||||||||.||||||||||||||||||||||||||||||||||
BSU03530___yc 801 GGCGGGCTGGCTGTCAGATCTCCTCGGCAGCAGAAGCGTCATGCTATCCA 850
BSNT_00628___ 851 TCTTATTTTTCATTCGGCTGCTCAGCCTCATTTGCCTGCTCATTCCCATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 851 TCTTATTTTTCATTCGGCTGCTCAGCCTCATTTGCCTGCTCATTCCCATT 900
BSNT_00628___ 901 CTCGGAATTCATCACAGCGACCTTTGGTACTTCGGGTTTATCCTGTTATT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 901 CTCGGAATTCATCACAGCGACCTTTGGTACTTCGGGTTTATCCTGTTATT 950
BSNT_00628___ 951 CGGGCTCAGTTACACAGGCGTGATCCCGCTGACCGCGGCGTCAATTTCGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 951 CGGGCTCAGTTACACAGGCGTGATCCCGCTGACCGCGGCGTCAATTTCGG 1000
BSNT_00628___ 1001 AAAGCTATCAAACAGGATTGATCGGATCGCTGTTAGGCATCAATTTCTTT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 1001 AAAGCTATCAAACAGGATTGATCGGATCGCTGTTAGGCATCAATTTCTTT 1050
BSNT_00628___ 1051 ATCCATCAGGTTGCCGGAGCTCTTAGCGTGTATGCGGGCGGTTTGTTTTT 1100
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU03530___yc 1051 ATCCATCAGGTTGCCGGAGCTCTCAGCGTGTATGCGGGCGGTTTGTTTTT 1100
BSNT_00628___ 1101 TGACATGACTCATGGTTATTTGCTGATTGTCGCTGTGTGCATCGTGTTTG 1150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU03530___yc 1101 TGACATGACTCATGGTTATTTACTGATTGTCGCTGTGTGCATCGTGTTTG 1150
BSNT_00628___ 1151 TGGGTTTATCGGCTGTAATAGAGCTGGTGCCGTTTTTAGATAAACAGAAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03530___yc 1151 TGGGTTTATCGGCTGTAATAGAGCTGGTGCCGTTTTTAGATAAACAGAAG 1200
BSNT_00628___ 1201 GCAAAAGAAACCCACCATTCAATATAA 1227
|||||||||||||||||||||||||||
BSU03530___yc 1201 GCAAAAGAAACCCACCATTCAATATAA 1227
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