Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00601 and BSU03390

See Amino acid alignment / Visit BSNT_00601 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:50
# Commandline: needle
#    -asequence dna-align/BSNT_00601___yckC.1.22522.seq
#    -bsequence dna-align/BSU03390___yckC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00601___yckC-BSU03390___yckC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00601___yckC-BSU03390___yckC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00601___yckC
# 2: BSU03390___yckC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     448/456 (98.2%)
# Similarity:   448/456 (98.2%)
# Gaps:           0/456 ( 0.0%)
# Score: 2208.0
# 
#
#=======================================

BSNT_00601___      1 ATGAATATTTACAAACCAGCCGGATTTTGGATCAGACTTGGAGCTGCATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03390___yc      1 ATGAATATTTACAAACCAGCCGGATTTTGGATCAGACTTGGAGCTGCATT     50

BSNT_00601___     51 GTTAGACTACATTATAGTCTCCGTGCCGCTTTTGCTGATCTATTGGCTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03390___yc     51 GTTAGACTACATTATAGTCTCCGTGCCGCTTTTGCTGATCTATTGGCTGA    100

BSNT_00601___    101 TTACAGGAAAAGACCCAAACGACAGCATGTTCATCAGTTTGGTTGTTCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03390___yc    101 TTACAGGAAAAGACCCAAACGACAGCATGTTCATCAGTTTGGTTGTTCTG    150

BSNT_00601___    151 CTGTATTCTATTTTGCTGCCGGTGTTTTGGCACGGTTATCTTATCGGAAA    200
                     |||||||||||||||||||||.|||||||||.||||||||||||||||||
BSU03390___yc    151 CTGTATTCTATTTTGCTGCCGATGTTTTGGCGCGGTTATCTTATCGGAAA    200

BSNT_00601___    201 AAGGATCTGCGGAATCAGAATCGTAAAAAAAGAAGGATCACAAGTCAGCC    250
                     |||||||||||||||||||||||||||||||||.||||||||.|||||.|
BSU03390___yc    201 AAGGATCTGCGGAATCAGAATCGTAAAAAAAGACGGATCACAGGTCAGTC    250

BSNT_00601___    251 TGTTAACAATGTTTTTACGGGTTATTGTAGCCGGCCTGGTTTACTTTATA    300
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU03390___yc    251 TGTTAACAATGTTTTTACGGGTTATTGTAGCCGGCCTGGTTTACTGTATA    300

BSNT_00601___    301 ACCTTCGGACTCGGCTTGATCGCCAGCCTGATTCTGATTGCCGTACGAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03390___yc    301 ACCTTCGGACTCGGCTTGATCGCCAGCCTGATTCTGATTGCCGTACGAGA    350

BSNT_00601___    351 AGACAAACGGACCCTGCATGATTTAATCGCGGGAACATATGTCACTTATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03390___yc    351 AGACAAACGGACCCTGCATGATTTAATCGCGGGAACATATGTCACTTATG    400

BSNT_00601___    401 CGACACCAGGTGAAGAAGAACTTAATACTGACGAAGAGATTAGAAAGAGC    450
                     ||||||||||||||||.|||||||||.|||||||||||||||||||||||
BSU03390___yc    401 CGACACCAGGTGAAGAGGAACTTAATGCTGACGAAGAGATTAGAAAGAGC    450

BSNT_00601___    451 GAATAA    456
                     ||||||
BSU03390___yc    451 GAATAA    456


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