Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00599 and BSU03380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:50
# Commandline: needle
# -asequence dna-align/BSNT_00599___yckB.1.22522.seq
# -bsequence dna-align/BSU03380___yckB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00599___yckB-BSU03380___yckB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00599___yckB-BSU03380___yckB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00599___yckB
# 2: BSU03380___yckB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 864
# Identity: 848/864 (98.1%)
# Similarity: 848/864 (98.1%)
# Gaps: 0/864 ( 0.0%)
# Score: 4176.0
#
#
#=======================================
BSNT_00599___ 1 GTGAAATCATTCAAGCAATCCAAAGCCGTTATATTCAGTTTCACAATGGC 50
|||||||||||||.|||.||||||||||||||||||||||||||||||||
BSU03380___yc 1 GTGAAATCATTCATGCATTCCAAAGCCGTTATATTCAGTTTCACAATGGC 50
BSNT_00599___ 51 TTTCTTTCTTATATTGGCAGCCTGTTCCGGCAAAAATGAAGCCGATTCCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 51 TTTCTTTCTTATATTGGCAGCCTGTTCCGGCAAAAATGAAGCCGATTCCA 100
BSNT_00599___ 101 AGGATACAGGCTGGGAGCAAATCAAGGACAAAGGGAAAATCGTAGTCGCT 150
|||||||||||||||||||.||.|||||.|||||||||||||||||||||
BSU03380___yc 101 AGGATACAGGCTGGGAGCAGATTAAGGATAAAGGGAAAATCGTAGTCGCT 150
BSNT_00599___ 151 ACATCAGGTACGCTCTACCCCACTTCTTATCACGATACTGACTCAGGCTC 200
|||||||||||||||||.||||||||||||||||||||||||||.|||||
BSU03380___yc 151 ACATCAGGTACGCTCTATCCCACTTCTTATCACGATACTGACTCTGGCTC 200
BSNT_00599___ 201 CGATAAGCTGACGGGCTACGAGGTTGAAGTTGTTCGTGAAGCGGCAAAAC 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 201 TGATAAGCTGACGGGCTACGAGGTTGAAGTTGTTCGTGAAGCGGCAAAAC 250
BSNT_00599___ 251 GCCTGGGACTGAAGGTTGAGTTCAAGGAGATGGGCATTGACGGGATGCTG 300
||.||||.||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 251 GCTTGGGGCTGAAGGTTGAGTTCAAGGAGATGGGCATTGACGGGATGCTG 300
BSNT_00599___ 301 ACAGCGGTGAACAGCGGACAGGTTGACGCAGCCGCGAATGACATCGATGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 301 ACAGCGGTGAACAGCGGACAGGTTGACGCAGCCGCGAATGACATCGATGT 350
BSNT_00599___ 351 GACGAAGGACCGCGAGAAGAAGTTCGCATTTTCTACTCCATATAAATATT 400
||||||||||||.|||.||||||||||||||||.||||||||||||||||
BSU03380___yc 351 GACGAAGGACCGTGAGGAGAAGTTCGCATTTTCCACTCCATATAAATATT 400
BSNT_00599___ 401 CATACGGTACGGCAATTGTCCGAAAAGACGATTTATCAGGGATTAAAACG 450
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 401 CATACGGCACGGCAATTGTCCGAAAAGACGATTTATCAGGGATTAAAACG 450
BSNT_00599___ 451 CTTAAGGATTTAAAAGGGAAGAAAGCGGCTGGCGCGGCTACAACCGTCTA 500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 451 CTCAAGGATTTAAAAGGGAAGAAAGCGGCTGGCGCGGCTACAACCGTCTA 500
BSNT_00599___ 501 CATGGAGGTCGCGAGAAAATACGGCGCCAAAGAAGTGATTTATGATAATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 501 CATGGAGGTCGCGAGAAAATACGGCGCCAAAGAAGTGATTTATGATAATG 550
BSNT_00599___ 551 CGACGAATGAGCAATATTTAAAAGATGTTGCCAACGGACGCACTGACGTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 551 CGACGAATGAGCAATATTTAAAAGATGTTGCCAACGGACGCACTGACGTC 600
BSNT_00599___ 601 ATTTTAAACGACTATTACCTGCAGACACTTGCGCTCGCGGCATTCCCGGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 601 ATTTTAAACGACTATTACCTGCAGACACTTGCGCTCGCGGCATTCCCGGA 650
BSNT_00599___ 651 TCTCAACATTACAATTCATCCTGACATCAAGTACATGCCGAACAAACAGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 651 TCTCAACATTACAATTCATCCTGACATCAAGTACATGCCGAACAAACAGG 700
BSNT_00599___ 701 CCCTTGTCATGAAAAAAAGCAATGAGGCACTTCAGAAAAAGATGAACGAA 750
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03380___yc 701 CCCTTGTCATGAAAAAAAGCAATGCGGCACTTCAGAAAAAGATGAACGAA 750
BSNT_00599___ 751 GCATTGAAAGAGATGAGCAAGGATGGCTCTTTGACTAAACTGTCGAAACA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 751 GCATTGAAAGAGATGAGCAAGGATGGCTCTTTGACTAAACTGTCGAAACA 800
BSNT_00599___ 801 ATTCTTCAATAAAGCAGATGTATCAAAAAAAATTGATGCCGACGTTCAGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03380___yc 801 ATTCTTCAATAAAGCAGATGTATCAAAAAAAATTGATGCCGACGTTCAGG 850
BSNT_00599___ 851 ACGTTGATTTGTAA 864
||||||||||||||
BSU03380___yc 851 ACGTTGATTTGTAA 864
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