Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00594 and BSU03360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:49
# Commandline: needle
# -asequence dna-align/BSNT_00594.1.22522.seq
# -bsequence dna-align/BSU03360___yciC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00594-BSU03360___yciC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00594-BSU03360___yciC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00594
# 2: BSU03360___yciC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1194
# Identity: 673/1194 (56.4%)
# Similarity: 673/1194 (56.4%)
# Gaps: 510/1194 (42.7%)
# Score: 3310.5
#
#
#=======================================
BSNT_00594 1 ATGAAAAAGATTCCGGTTACCGTACTGAGCGGATATCTAGGTGCGGGAAA 50
||||||||.|||||||||||||||||||||||.|||||.|||||||||||
BSU03360___yc 1 ATGAAAAAAATTCCGGTTACCGTACTGAGCGGTTATCTCGGTGCGGGAAA 50
BSNT_00594 51 AACAACATTGCTGAACAGCATTCTGCAAAATCGCGAAGGCTTGAAAATAG 100
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU03360___yc 51 AACAACATTGCTGAACAGCATTTTGCAAAATCGCGAAGGCTTGAAAATAG 100
BSNT_00594 101 CGGTTATCGTAAACGATATGAGCGAGGTGAACATTGACGCGGGCTTGGTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 101 CGGTTATCGTAAACGATATGAGCGAGGTGAACATTGACGCGGGCTTGGTT 150
BSNT_00594 151 AAGCAGGAAGGGGGCCTTTCCAGAACAGATGAAAAGCTTGTGGAAATGTC 200
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU03360___yc 151 AAGCAGGAAGGTGGCCTTTCCAGAACAGATGAAAAGCTTGTGGAAATGTC 200
BSNT_00594 201 AAACGGCTGCATTTGCTGCACGCTTCGCGAAGACTTATTAATTGAAGTTG 250
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 201 AAATGGCTGCATTTGCTGCACGCTTCGCGAAGACTTATTAATTGAAGTTG 250
BSNT_00594 251 AGAAGCTGGCAAAAGACGGACGGTTTGATTATATCGTCATCGAATCGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 251 AGAAGCTGGCAAAAGACGGACGGTTTGATTATATCGTCATCGAATCGACA 300
BSNT_00594 301 GGAATCAGCGAACCGATCCCGGTGGCCCAGACTTTCTCTTATATCGATGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 301 GGAATCAGCGAACCGATCCCGGTGGCCCAGACTTTCTCTTATATCGATGA 350
BSNT_00594 351 AGAGATGGGAATCGATCTTACAAAATTCTGTCAGCTGGATACGATGGTGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 351 AGAGATGGGAATCGATCTTACAAAATTCTGTCAGCTGGATACGATGGTGA 400
BSNT_00594 401 CAGTGGTTGATGCCAACCGTTTTTGGCATGATTATCAGTCAGGCGAAAGC 450
|.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 401 CGGTTGTTGATGCCAACCGTTTTTGGCATGATTATCAGTCAGGCGAAAGC 450
BSNT_00594 451 CTTCTGGACCGCAAAGAAGCATTGGGGGAAGAGGATGAAAGAGAAATCGC 500
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU03360___yc 451 CTTCTGGACCGCAAAGAAGCATTGGGGGAAAAGGATGAAAGAGAAATCGC 500
BSNT_00594 501 CGACCTCTTGATCGATCAAATTGAGTTTTGCGATGTACTGATCTTAAATA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 501 CGACCTCTTGATCGATCAAATTGAGTTTTGCGATGTACTGATCTTAAATA 550
BSNT_00594 551 AATGTGATTTGGTCAGCGAGCAAGAGCTCGAACAGCTTGAAAACGTTCTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 551 AATGTGATTTGGTCAGCGAGCAAGAGCTCGAACAGCTTGAAAACGTTCTT 600
BSNT_00594 601 CGTAAACTGCAGCCAAGAGCCAAGTTCATTCG--CTGTCAAAGGAAATGT 648
||||||||||||||||||||||.||||||||| |.||||||||||||||
BSU03360___yc 601 CGTAAACTGCAGCCAAGAGCCAGGTTCATTCGTTCCGTCAAAGGAAATGT 650
BSNT_00594 649 AAAACCGCAGGAGATTTTGCATACAGGGTTATTTAA-------------- 684
||||||||||||||||||||||||||||||||||||
BSU03360___yc 651 AAAACCGCAGGAGATTTTGCATACAGGGTTATTTAACTTCGAGGAAGCGA 700
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 701 GCGGATCGGCCGGCTGGATTCAAGAGCTGACGGCAGGCCATGCGGAACAC 750
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 751 ACCCCGGAAACAGAAGAATACGGTATCTCTTCATTTGTATATAAGAGACG 800
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 801 TTTGCCGTTTCATTCTACACGATTTTACCGTTGGTTGGATCAAATGCCAA 850
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 851 AGAACGTGGTACGTGCCAAAGGAATCGTCTGGTGCGCATCTCATAACAAC 900
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 901 CTCGCTTTGCTGATGTCGCAAGCAGGTCCGTCGGTTACGATTGAGCCTGT 950
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 951 ATCTTATTGGGTGGCGGCGTTGCCGAAGCTTGAGCAGGAGCAAGTCAAAC 1000
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 1001 AGCAGGAGCCGGAAATCCTGGAGGAGTGGGACCCGGAGTTCGGCGACCGC 1050
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 1051 CTAACGCAGCTAGTTTTTATCGGAACTGACCTGGATGAAGAAACGATCAC 1100
BSNT_00594 684 -------------------------------------------------- 684
BSU03360___yc 1101 GAAAGAGCTTGATCAATGCCTGTTGACTGAGTATGAATTTGATTCCGACT 1150
BSNT_00594 684 -------------------------------------------- 684
BSU03360___yc 1151 GGTCGCTGTTTGAGGACCCGTTTAAATGGAAGCTGAATCAATAG 1194
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