Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00593 and BSU03359
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:49
# Commandline: needle
# -asequence dna-align/BSNT_00593.1.22522.seq
# -bsequence dna-align/BSU03359___yczL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00593-BSU03359___yczL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00593-BSU03359___yczL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00593
# 2: BSU03359___yczL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 169/225 (75.1%)
# Similarity: 169/225 (75.1%)
# Gaps: 42/225 (18.7%)
# Score: 720.5
#
#
#=======================================
BSNT_00593 1 ATGTTTGCGCTTTCCATCGGTTCAGCAACGCAAGTGGA---GCAATTGCT 47
||..| |||.||| || ||.|.|
BSU03359___yc 1 -------------------GTGAA-------AAGCGGAAAGGC-ATCGAT 23
BSNT_00593 48 TTATGCAAGCTGCGGTTTTCCGAATGTCGGCAAGGGCAGGGATTTGCGAT 97
| ||| |.|.||.| |||||||||.||||.|||||||||||
BSU03359___yc 24 T-----AAG----GATCTTGC---TGTCGGCAAAGGCAAGGATTTGCGAT 61
BSNT_00593 98 GGGGAAAAGGATTAAACGCGGTTGGAGCCTTTACTGATTTAGAAATCGGG 147
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU03359___yc 62 GGGGAAAAGGATTAAACGCGGTTGGAGTCTTTACTGATTTAGAAATCGGG 111
BSNT_00593 148 CAGCAGCGAGAAATGAGCGCGAAAAGCTGCTCTACACCATTGTACATATG 197
|.||||||||||||||||||||||||||||||||||||||||||||||.|
BSU03359___yc 112 CGGCAGCGAGAAATGAGCGCGAAAAGCTGCTCTACACCATTGTACATACG 161
BSNT_00593 198 GCGAAGTATACAATTTAAATCGTAA 222
|||||||||.|||||||||||||||
BSU03359___yc 162 GCGAAGTATTCAATTTAAATCGTAA 186
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