Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00590 and BSU03350

See Amino acid alignment / Visit BSNT_00590 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:49
# Commandline: needle
#    -asequence dna-align/BSNT_00590.1.22522.seq
#    -bsequence dna-align/BSU03350___yciB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00590-BSU03350___yciB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00590-BSU03350___yciB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00590
# 2: BSU03350___yciB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     364/585 (62.2%)
# Similarity:   364/585 (62.2%)
# Gaps:         213/585 (36.4%)
# Score: 1788.0
# 
#
#=======================================

BSNT_00590         0 --------------------------------------------------      0
                                                                       
BSU03350___yc      1 ATGAAACTCTCATTATTCATTATTGCAGTTCTTATGCCAGTCATCCTGCT     50

BSNT_00590         0 --------------------------------------------------      0
                                                                       
BSU03350___yc     51 GTCAGCCTGCTCCGATCATGCAGAAGAACACGCAAGTATCAATACAAAGA    100

BSNT_00590         0 --------------------------------------------------      0
                                                                       
BSU03350___yc    101 AAACGGTCGAAAACATAACGGACGTTCGAAAAACAGCAAAAACAAGCATT    150

BSNT_00590         0 --------------------------------------------------      0
                                                                       
BSU03350___yc    151 GATTGGACAAAGCCTTCGGGCGGAGAATACCCGGATATTAAACAGAAGCA    200

BSNT_00590         1 -------------GTGAATGTGAAGGAGCAGAAGGCTTACATCAAGGAAG     37
                                  |||||||||||||||||||||||||||||||||||||
BSU03350___yc    201 TGTCTGGATTGATGTGAATGTGAAGGAGCAGAAGGCTTACATCAAGGAAG    250

BSNT_00590        38 GAAGCAACACCATCTATACAATGATGATCTCTTCTGGTCTTGATCAAACA     87
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU03350___yc    251 GAAGCAACACCATCTATACAATGATGATTTCTTCTGGTCTTGATCAAACA    300

BSNT_00590        88 AAAGATGATGCTACGCCAAAGGGCACCTTTTATGTAGAGCCTGAACGGGG    137
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03350___yc    301 AAAGATGATGCTACGCCAAAGGGCACCTTTTATGTAGAGCCTGAACGGGG    350

BSNT_00590       138 AGAATGGTTTTTCTCCGAAGGATACCAGGAAGGCGCAGAATACTGGGTAT    187
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03350___yc    351 AGAATGGTTTTTCTCCGAAGGATACCAGGAAGGCGCAGAATACTGGGTAT    400

BSNT_00590       188 CATGGAAAAACCACGGCGAATTTCTATTTCATAGTGTGCCAATGACAAAG    237
                     ||||||||||.|||||.||||||.||||||||||||||||||||||.|||
BSU03350___yc    401 CATGGAAAAATCACGGTGAATTTTTATTTCATAGTGTGCCAATGACTAAG    450

BSNT_00590       238 GATCAAAAAGTCATCAAAACGGAAGCAGAAAAACTAGGAACGAAAGCATC    287
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03350___yc    451 GATCAAAAAGTCATCAAAACGGAAGCAGAAAAACTAGGAACGAAAGCATC    500

BSNT_00590       288 TCACGGTTGTATCAGGCTGACCATTCCAGATGCAAAATGGATATATGAAA    337
                     ||||||.||||||||||||||||||||||||||.||||||.|||||||||
BSU03350___yc    501 TCACGGATGTATCAGGCTGACCATTCCAGATGCGAAATGGGTATATGAAA    550

BSNT_00590       338 ATATCCCTGAACATACAAAAGTGGTGATCAGCTGA    372
                     |||||||||||||||||||||||||||||||||||
BSU03350___yc    551 ATATCCCTGAACATACAAAAGTGGTGATCAGCTGA    585


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