Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00573 and BSU03240

See Amino acid alignment / Visit BSNT_00573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:46
# Commandline: needle
#    -asequence dna-align/BSNT_00573___ycgQ.1.22522.seq
#    -bsequence dna-align/BSU03240___ycgQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00573___ycgQ-BSU03240___ycgQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00573___ycgQ-BSU03240___ycgQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00573___ycgQ
# 2: BSU03240___ycgQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     855/858 (99.7%)
# Similarity:   855/858 (99.7%)
# Gaps:           0/858 ( 0.0%)
# Score: 4263.0
# 
#
#=======================================

BSNT_00573___      1 ATGTTTCGTCTATTGGTGCTGATGGGATTTACGTTTTTCTTTTATCATCT     50
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03240___yc      1 ATGTTTCGTTTATTGGTGCTGATGGGATTTACGTTTTTCTTTTATCATCT     50

BSNT_00573___     51 GCATGCCTCAGGAAATCTAACAAAATATATCAATATGAAATATGCCTATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc     51 GCATGCCTCAGGAAATCTAACAAAATATATCAATATGAAATATGCCTATC    100

BSNT_00573___    101 TTTCCTTTATTGCGATCTTCCTGCTGGCCATTCTGACCGCCGTCCAAGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    101 TTTCCTTTATTGCGATCTTCCTGCTGGCCATTCTGACCGCCGTCCAAGCA    150

BSNT_00573___    151 TATCTATTTATCAAGTCGCCTGAAAAAAGCGGTCATCACCATGACCATGA    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU03240___yc    151 TATCTATTTATCAAGTCGCCTGAAAAAAGCGGACATCACCATGACCATGA    200

BSNT_00573___    201 TTGCGGGTGCAGCCATGATCACGAGCATGACCATGAACAAAACAAGCCAT    250
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03240___yc    201 TTGCGGGTGCGGCCATGATCACGAGCATGACCATGAACAAAACAAGCCAT    250

BSNT_00573___    251 TTTATCAGCGTTATTTGATTTATGTTGTTTTTCTTTTTCCTTTGGTGTCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    251 TTTATCAGCGTTATTTGATTTATGTTGTTTTTCTTTTTCCTTTGGTGTCA    300

BSNT_00573___    301 GGCATCTTCTTCCCGATTGCAACGCTTGACTCATCCATAGTCAAAACAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    301 GGCATCTTCTTCCCGATTGCAACGCTTGACTCATCCATAGTCAAAACAAA    350

BSNT_00573___    351 AGGGTTCTCGTTTAAGGCGATGGAGAGCGGAGATCACTACTCCCAAACAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    351 AGGGTTCTCGTTTAAGGCGATGGAGAGCGGAGATCACTACTCCCAAACAC    400

BSNT_00573___    401 AGTATTTGCGGCCTGATGCCAGCCTTTATTACGCGCAAGACAGCTATGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    401 AGTATTTGCGGCCTGATGCCAGCCTTTATTACGCGCAAGACAGCTATGAC    450

BSNT_00573___    451 AAACAAATGAAACAGCTGTTTAATAAGTATTCCAGCAAAAAAGAGATTTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    451 AAACAAATGAAACAGCTGTTTAATAAGTATTCCAGCAAAAAAGAGATTTC    500

BSNT_00573___    501 TCTGACCGATGACGATTTCCTAAAAGGAATGGAAACCATCTATAACTATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    501 TCTGACCGATGACGATTTCCTAAAAGGAATGGAAACCATCTATAACTATC    550

BSNT_00573___    551 CGGGTGAATTTCTCGGACGGACGATAGAATTTCATGGATTTGCTTACAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    551 CGGGTGAATTTCTCGGACGGACGATAGAATTTCATGGATTTGCTTACAAA    600

BSNT_00573___    601 GGAAACGCAATTAACAAAAATCAGCTGTTCGTATTAAGGTTTGGCATCAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    601 GGAAACGCAATTAACAAAAATCAGCTGTTCGTATTAAGGTTTGGCATCAT    650

BSNT_00573___    651 TCACTGTATCGCTGATTCCGGCGTGTACGGGATGCTTGTGGAATTTCCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    651 TCACTGTATCGCTGATTCCGGCGTGTACGGGATGCTTGTGGAATTTCCGA    700

BSNT_00573___    701 AGGACATGGACATCAAGGATGATGAATGGATTCACATTAAGGGCACTCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    701 AGGACATGGACATCAAGGATGATGAATGGATTCACATTAAGGGCACTCTG    750

BSNT_00573___    751 GCCTCAGAATATTACCAGCCATTCAAGTCAACTCTCCCTGTCGTCAAAGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    751 GCCTCAGAATATTACCAGCCATTCAAGTCAACTCTCCCTGTCGTCAAAGT    800

BSNT_00573___    801 AACTGACTGGAATACCATTAAAAAACCTGATGATCCGTATGTTTACAGAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03240___yc    801 AACTGACTGGAATACCATTAAAAAACCTGATGATCCGTATGTTTACAGAG    850

BSNT_00573___    851 GATTTTAA    858
                     ||||||||
BSU03240___yc    851 GATTTTAA    858


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