Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00572 and BSU03230

See Amino acid alignment / Visit BSNT_00572 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:46
# Commandline: needle
#    -asequence dna-align/BSNT_00572___ycgP.1.22522.seq
#    -bsequence dna-align/BSU03230___ycgP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00572___ycgP-BSU03230___ycgP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00572___ycgP-BSU03230___ycgP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00572___ycgP
# 2: BSU03230___ycgP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1236
# Identity:    1231/1236 (99.6%)
# Similarity:  1231/1236 (99.6%)
# Gaps:           0/1236 ( 0.0%)
# Score: 6135.0
# 
#
#=======================================

BSNT_00572___      1 ATGGAAGAGCTTTTAGAGAGAGTTTTTTCATTTTCAGATGTTGATAAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc      1 ATGGAAGAGCTTTTAGAGAGAGTTTTTTCATTTTCAGATGTTGATAAGCT     50

BSNT_00572___     51 GATTGATTTTATTAGCTATGAACTGCAAAAGCCAGTGATACTGGAAAGCG    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc     51 AATTGATTTTATTAGCTATGAACTGCAAAAGCCAGTGATACTGGAAAGCG    100

BSNT_00572___    101 CGGATTTCTTTTTGCTAGCCTATAATTCTTACTATATTAACCATTTTGAT    150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU03230___yc    101 CGGATTTCTTTTTGTTAGCCTATAATTCTTACTATATTAACCATTTTGAT    150

BSNT_00572___    151 TCTGCCAACCAGCAGACTATTTTTTCGAAAAAGTGTCCGGTCCAGATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    151 TCTGCCAACCAGCAGACTATTTTTTCGAAAAAGTGTCCGGTCCAGATTTT    200

BSNT_00572___    201 TGAGAGGTTTCTGAAGGACGGAATTATTGAAAAATTGAAAACAGAGCCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    201 TGAGAGGTTTCTGAAGGACGGAATTATTGAAAAATTGAAAACAGAGCCTG    250

BSNT_00572___    251 AGCCTTTTCGCGTCAATAAAATTGAAAGCATTGGGTTAAACCAGAGGGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    251 AGCCTTTTCGCGTCAATAAAATTGAAAGCATTGGGTTAAACCAGAGGGTG    300

BSNT_00572___    301 GTCGTGAGTGCAAAGCACAAAGGGGAAGTCATGGGCTACATCTGGATTCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    301 GTCGTGAGTGCAAAGCACAAAGGGGAAGTCATGGGCTACATCTGGATTCA    350

BSNT_00572___    351 GGAGCTGGACCAAAATCTGACGGATGAAGAGCTCGACTTTTTGTACGAGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    351 GGAGCTGGACCAAAATCTGACGGATGAAGAGCTCGACTTTTTGTACGAGA    400

BSNT_00572___    401 CCTCCTTCCATGTCGGGAAAATCATTTATAAAACGAATAAATTGAAACAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    401 CCTCCTTCCATGTCGGGAAAATCATTTATAAAACGAATAAATTGAAACAG    450

BSNT_00572___    451 GAAAAGGAAGAAAAAGCAGAGGATCTCATCAAACGGGCGATCTATCAGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    451 GAAAAGGAAGAAAAAGCAGAGGATCTCATCAAACGGGCGATCTATCAGCA    500

BSNT_00572___    501 ATTTACCTCTGAGAAGGAACTCAGACGGGAAGCTGAAAGGATCAACACCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    501 ATTTACCTCTGAGAAGGAACTCAGACGGGAAGCTGAAAGGATCAACACCG    550

BSNT_00572___    551 TGCTGCCTTCCATGTTTTCAGTTGTGATCCTGCACGCCGCAAATGGGGAT    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03230___yc    551 TGCTGCCTTCCATGTTTTCAGTTGTTATCCTGCACGCCGCAAATGGGGAT    600

BSNT_00572___    601 GGGGAAGCGGTTGAGGATTTAAAGGAAAATATCAGGTCGTACCTGAATTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    601 GGGGAAGCGGTTGAGGATTTAAAGGAAAATATCAGGTCGTACCTGAATTT    650

BSNT_00572___    651 ACGGGATAAGGTCAGTCATGTCTTAACGATCGAATCAAATATTGTCATCG    700
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03230___yc    651 ACGGGATAAGGTCAGTCATGTCTTAACGATCGAATCAAACATTGTCATCG    700

BSNT_00572___    701 TCGTAGCGAGTTTTTCCCAAAAAAGCTCCGTCTCCTCAGCAGCTTCTGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    701 TCGTAGCGAGTTTTTCCCAAAAAAGCTCCGTCTCCTCAGCAGCTTCTGAG    750

BSNT_00572___    751 TTTATTAACAAGCTGTTAACACATTTTCACTTTCAAAAAATACCTACCCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    751 TTTATTAACAAGCTGTTAACACATTTTCACTTTCAAAAAATACCTACCCC    800

BSNT_00572___    801 TATTTATATCGGTATCGGAAACGAATATAATCACCTATTAAAACTTGGCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    801 TATTTATATCGGTATCGGAAACGAATATAATCACCTATTAAAACTTGGCA    850

BSNT_00572___    851 AGAGCTACACAGAAGCACTTGAAGTCATCAAAGCCGCAGAAATCACCGGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    851 AGAGCTACACAGAAGCACTTGAAGTCATCAAAGCCGCAGAAATCACCGGC    900

BSNT_00572___    901 AATCAGGAAAACATTCCATATGAATATGCCAAACTCGGCATTTACCGCTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    901 AATCAGGAAAACATTCCATATGAATATGCCAAACTCGGCATTTACCGCTA    950

BSNT_00572___    951 TTTAGAAAGCATCGAACAGAAAAATGAATTTTTAGAATACGAGAATAAAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc    951 TTTAGAAAGCATCGAACAGAAAAATGAATTTTTAGAATACGAGAATAAAG   1000

BSNT_00572___   1001 ATTTAGCTTTATTAAAAGCGAAAGACGAAGAAAGCAGCACTGAGCTGCTC   1050
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU03230___yc   1001 ATTTAGCTTTATTAAAAGCAAAAGACGAAGAAAGCAGCACTGAGCTGCTC   1050

BSNT_00572___   1051 AAAACCTTGGAAATCTATCTCCTCAACAACTGCAAAACAAAACCAGCGGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc   1051 AAAACCTTGGAAATCTATCTCCTCAACAACTGCAAAACAAAACCAGCGGC   1100

BSNT_00572___   1101 AGAACAGCTGTTTATTCACCAAAATACATTGAATTACCGCATCAAACAGA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc   1101 AGAACAGCTGTTTATTCACCAAAATACATTGAATTACCGCATCAAACAGA   1150

BSNT_00572___   1151 TTACTGAGATGACGTCGATCGATTTAAGCGATTTCAGAACGCGGTGCCAG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03230___yc   1151 TTACTGAGATGACGTCGATCGATTTAAGCGATTTCAGAACGCGGTGCCAG   1200

BSNT_00572___   1201 CTCTATCTCGATTTGATGCTGATGAAAAAGAAATAA   1236
                     ||||||||||||||||||||||||||||||||||||
BSU03230___yc   1201 CTCTATCTCGATTTGATGCTGATGAAAAAGAAATAA   1236


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