Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00568 and BSU03200

See Amino acid alignment / Visit BSNT_00568 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:45
# Commandline: needle
#    -asequence dna-align/BSNT_00568___ycgM.1.22522.seq
#    -bsequence dna-align/BSU03200___ycgM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00568___ycgM-BSU03200___ycgM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00568___ycgM-BSU03200___ycgM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00568___ycgM
# 2: BSU03200___ycgM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     910/912 (99.8%)
# Similarity:   910/912 (99.8%)
# Gaps:           0/912 ( 0.0%)
# Score: 4542.0
# 
#
#=======================================

BSNT_00568___      1 GTGATCACAAGAGATTTTTTCTTATTTTTATCCAAAAGCGGCTTTCTCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc      1 GTGATCACAAGAGATTTTTTCTTATTTTTATCCAAAAGCGGCTTTCTCAA     50

BSNT_00568___     51 TAAAATGGCGAGGAACTGGGGAAGCCGGGTAGCAGCGGGTAAAATTATCG    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03200___yc     51 TAAAATGGCGAGGAACTGGGGAAGTCGGGTAGCAGCGGGTAAAATTATCG    100

BSNT_00568___    101 GCGGGAATGACTTTAACAGTTCAATCCCGACCATTCGACAGCTTAACAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    101 GCGGGAATGACTTTAACAGTTCAATCCCGACCATTCGACAGCTTAACAGC    150

BSNT_00568___    151 CAAGGCTTGTCAGTTACTGTCGATCATTTAGGCGAGTTTGTGAACAGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    151 CAAGGCTTGTCAGTTACTGTCGATCATTTAGGCGAGTTTGTGAACAGCGC    200

BSNT_00568___    201 CGAGGTCGCACGGGAGCGTACGGAAGAGTGCATTCAAACCATTGCGACCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    201 CGAGGTCGCACGGGAGCGTACGGAAGAGTGCATTCAAACCATTGCGACCA    250

BSNT_00568___    251 TCGCGGATCAGGAGCTGAACTCACACGTTTCTTTAAAAATGACGTCTTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    251 TCGCGGATCAGGAGCTGAACTCACACGTTTCTTTAAAAATGACGTCTTTA    300

BSNT_00568___    301 GGTTTGGATATAGATATGGATTTGGTGTATGAAAATATGACAAAAATCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    301 GGTTTGGATATAGATATGGATTTGGTGTATGAAAATATGACAAAAATCCT    350

BSNT_00568___    351 TCAGACGGCCGAGAAACATAAAATCATGGTCACCATTGACATGGAGGACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    351 TCAGACGGCCGAGAAACATAAAATCATGGTCACCATTGACATGGAGGACG    400

BSNT_00568___    401 AAGTCAGATGCCAGAAAACGCTTGATATTTTCAAAGATTTCAGAAAGAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    401 AAGTCAGATGCCAGAAAACGCTTGATATTTTCAAAGATTTCAGAAAGAAA    450

BSNT_00568___    451 TACGAGCATGTGAGCACAGTGCTGCAAGCCTATCTGTACCGGACGGAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    451 TACGAGCATGTGAGCACAGTGCTGCAAGCCTATCTGTACCGGACGGAAAA    500

BSNT_00568___    501 AGACATTGACGATTTGGATTCTTTAAACCCGTTCCTTCGCCTTGTAAAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    501 AGACATTGACGATTTGGATTCTTTAAACCCGTTCCTTCGCCTTGTAAAAG    550

BSNT_00568___    551 GAGCTTATAAAGAATCAGAAAAAGTAGCTTTCCCGGAGAAAAGCGATGTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    551 GAGCTTATAAAGAATCAGAAAAAGTAGCTTTCCCGGAGAAAAGCGATGTC    600

BSNT_00568___    601 GATGAAAATTACAAAAAAATCATCCGAAAGCAGCTCTTAAACGGTCACTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    601 GATGAAAATTACAAAAAAATCATCCGAAAGCAGCTCTTAAACGGTCACTA    650

BSNT_00568___    651 TACAGCGATTGCCACACATGACGACAAAATGATCGACTTTACAAAGCAGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    651 TACAGCGATTGCCACACATGACGACAAAATGATCGACTTTACAAAGCAGC    700

BSNT_00568___    701 TTGCCAAGGAACATGGCATTGCCAATGACAAGTTTGAATTTCAGATGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    701 TTGCCAAGGAACATGGCATTGCCAATGACAAGTTTGAATTTCAGATGCTG    750

BSNT_00568___    751 TACGGCATGCGGTCGCAAACCCAGCTCAGCCTCGTAAAAGAAGGTTATAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    751 TACGGCATGCGGTCGCAAACCCAGCTCAGCCTCGTAAAAGAAGGTTATAA    800

BSNT_00568___    801 CATGAGAGTCTACCTGCCATACGGCGAGGATTGGTACGGCTATTTTATGA    850
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU03200___yc    801 CATGAGAGTCTACCTGCCATACGGCGAGGATTGGTACGGCTACTTTATGA    850

BSNT_00568___    851 GACGCCTTGCAGAACGTCCGTCAAACATTGCATTTGCTTTCAAAGGAATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03200___yc    851 GACGCCTTGCAGAACGTCCGTCAAACATTGCATTTGCTTTCAAAGGAATG    900

BSNT_00568___    901 ACAAAGAAGTAA    912
                     ||||||||||||
BSU03200___yc    901 ACAAAGAAGTAA    912


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00568 and BSU03200

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
