Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00567 and BSU03190

See Amino acid alignment / Visit BSNT_00567 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:45
# Commandline: needle
#    -asequence dna-align/BSNT_00567___ycgL.1.22522.seq
#    -bsequence dna-align/BSU03190___ycgL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00567___ycgL-BSU03190___ycgL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00567___ycgL-BSU03190___ycgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00567___ycgL
# 2: BSU03190___ycgL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     771/861 (89.5%)
# Similarity:   771/861 (89.5%)
# Gaps:          78/861 ( 9.1%)
# Score: 3807.0
# 
#
#=======================================

BSNT_00567___      1 GTGAAAAGCCGCCGCATATCATCAGGCGGTTTTTTTCTGCAAACTGCCGG     50
                                                                       
BSU03190___yc      0 --------------------------------------------------      0

BSNT_00567___     51 AATGAGAACAGACTGGAGACGAATAGATATGAAACAAAGAATCATTGATG    100
                                                 ||||||||||||||||||||||
BSU03190___yc      1 ----------------------------ATGAAACAAAGAATCATTGATG     22

BSNT_00567___    101 AATTAAAACGGATCGAGCAGTCATATGGAGTCAAAATCGTGTATGCCGTC    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03190___yc     23 AATTAAAACGGATCGAGCAGTCATACGGAGTCAAAATCGTGTATGCCGTC     72

BSNT_00567___    151 GAGTCAGGAAGCCGCGCATGGGGATTTCCGTCGCAGGATAGTGATTACGA    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU03190___yc     73 GAGTCAGGAAGCCGCGCATGGGGATTTCCCTCGCAGGATAGTGATTACGA    122

BSNT_00567___    201 CGTCCGCTTTATTTATGTGCCGAAAAAGGAGTGGTATTTTTCAATTGAGC    250
                     ||||||||||||||||||.|||||||||||||||||.|||||||||||||
BSU03190___yc    123 CGTCCGCTTTATTTATGTTCCGAAAAAGGAGTGGTACTTTTCAATTGAGC    172

BSNT_00567___    251 AGGAGCGTGATGTCATTGAGGAACCGATTCACGATTTGCTGGATATCAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    173 AGGAGCGTGATGTCATTGAGGAACCGATTCACGATTTGCTGGATATCAGC    222

BSNT_00567___    301 GGCTGGGAGCTGAGAAAAACGCTTAGGCTTTTCAAAAAGTCAAACCCTCC    350
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03190___yc    223 GGCTGGGAGCTGAGAAAAACGCTTCGGCTTTTCAAAAAGTCAAACCCTCC    272

BSNT_00567___    351 GCTCCTCGAATGGCTGTCCTCAGACATTGTGTATTACGAAGCATTTACGA    400
                     |||.||||||||||||||||||||||||||||||||.|||||||||||||
BSU03190___yc    273 GCTACTCGAATGGCTGTCCTCAGACATTGTGTATTATGAAGCATTTACGA    322

BSNT_00567___    401 CCGCAGAGCAGTTAAGAAAACTGCGCACGGAGGCATTTAAGCCTGAAGCA    450
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU03190___yc    323 CCGCAGAGCAGTTAAGAAAACTCCGCACGGAGGCATTTAAGCCTGAAGCA    372

BSNT_00567___    451 AGCGTGTATCACTATATCAATATGGCGAGAAGGAACGTCAAAGATTATCT    500
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU03190___yc    373 AGCGTGTATCACTATATCAATATGGCGAGAAGGAACGTCAAGGATTATCT    422

BSNT_00567___    501 ACAAGGACAAGAGGTCAAAATTAAAAAGTACTTCTACGTTCTTCGGCCTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    423 ACAAGGACAAGAGGTCAAAATTAAAAAGTACTTCTACGTTCTTCGGCCTA    472

BSNT_00567___    551 TTTTGGCCTGCCAATGGATTGAAAAGCACGGAACCATACCGCCAATGGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    473 TTTTGGCCTGCCAATGGATTGAAAAGCACGGAACCATACCGCCAATGGAC    522

BSNT_00567___    601 TTTACTGTTTTGATGAATGAACTTGTTCGTGAACCCGAGCTGAAGGCTGA    650
                     |||||||||||||||||||||||||||..|||||||||||||||||||||
BSU03190___yc    523 TTTACTGTTTTGATGAATGAACTTGTTGCTGAACCCGAGCTGAAGGCTGA    572

BSNT_00567___    651 AATGGAAACCTTGCTTGAACGGAAAAGAAGAGGGGAAGAGCTTGACCTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    573 AATGGAAACCTTGCTTGAACGGAAAAGAAGAGGGGAAGAGCTTGACCTCG    622

BSNT_00567___    701 AAGCAAGAATCGATGTAATTCACCAATTCATTGAAACGGAAATCGAAAGA    750
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU03190___yc    623 AAGCAAGAATCGATGTTATTCACCAATTCATTGAAACGGAAATCGAAAGA    672

BSNT_00567___    751 ATCATGGAAGCGGCAAAAGAACTGAAGGCAGAGAAAAAAGATATGACATC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    673 ATCATGGAAGCGGCAAAAGAACTGAAGGCAGAGAAAAAAGATATGACATC    722

BSNT_00567___    801 TGAATTGAACCGTTTGCTTTTGAATACGGTTGAAGAAGTGTGGAAGGATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03190___yc    723 TGAATTGAACCGTTTGCTTTTGAATACGGTTGAAGAAGTGTGGAAGGATG    772

BSNT_00567___    851 GAGGAAGCTGA    861
                     |||||||||||
BSU03190___yc    773 GAGGAAGCTGA    783


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00567 and BSU03190

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
