Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00564 and BSU03180

See Amino acid alignment / Visit BSNT_00564 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:45
# Commandline: needle
#    -asequence dna-align/BSNT_00564___cah.1.22522.seq
#    -bsequence dna-align/BSU03180___cah.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00564___cah-BSU03180___cah.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00564___cah-BSU03180___cah.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00564___cah
# 2: BSU03180___cah
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity:     947/957 (99.0%)
# Similarity:   947/957 (99.0%)
# Gaps:           0/957 ( 0.0%)
# Score: 4695.0
# 
#
#=======================================

BSNT_00564___      1 ATGCAACTATTCGATCTGCCGCTCGACCAATTGCAAACATATAAGCCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca      1 ATGCAACTATTCGATCTGCCGCTCGACCAATTGCAAACATATAAGCCTGA     50

BSNT_00564___     51 AAAAACAGCACCGAAAGATTTTTCTGAGTTTTGGAAATTGTCTTTAGAGG    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU03180___ca     51 AAAAACAGCACCGAAAGATTTTTCTGAGTTTTGGAAATTGTCTTTGGAGG    100

BSNT_00564___    101 AACTTGCAAAAGTCCAAGCAGAACCTGATTTACAGCCGGTTGACTATCCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    101 AACTTGCAAAAGTCCAAGCAGAACCTGATTTACAGCCGGTTGACTATCCT    150

BSNT_00564___    151 GCTGACGGAGTAAAAGTGTACCGTCTCACATATAAAAGCTTCGGAAACGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    151 GCTGACGGAGTAAAAGTGTACCGTCTCACATATAAAAGCTTCGGAAACGC    200

BSNT_00564___    201 CCGCATTACCGGATGGTACGCAGTGCCTGACAAGGAAGGCCCGCATCCGG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU03180___ca    201 CCGCATTACCGGATGGTACGCGGTGCCTGACAAGGAAGGCCCGCATCCGG    250

BSNT_00564___    251 CGATGGTGAAATATCATGGCTACAATGCAAGCTATGATGGTGAGATTCAT    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    251 CGATCGTGAAATATCATGGCTACAATGCAAGCTATGATGGTGAGATTCAT    300

BSNT_00564___    301 GAAATGGTAAACTGGGCACTCCATGGCTACGCCGCATTCGGCATGCTTGT    350
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU03180___ca    301 GAAATGGTAAACTGGGCACTCCATGGCTACGCCACATTCGGCATGCTTGT    350

BSNT_00564___    351 CCGCGGCCAGCAGAGCAGCGAGGATACGAGTATTTCACCGCACGGTCACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    351 CCGCGGCCAGCAGAGCAGCGAGGATACGAGTATTTCACCGCACGGTCACG    400

BSNT_00564___    401 CTTTGGGCTGGATGACGAAAGGAATTCTTGATAAAGATACATACTATTAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    401 CTTTGGGCTGGATGACGAAAGGAATTCTTGATAAAGATACATACTATTAC    450

BSNT_00564___    451 CGCGGTGTTTATTTGGACGCCGTCCGCGCGCTTGAGGTCATCAGCAGTTT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU03180___ca    451 CGCGGTGTTTATTTGGACGCCGTCCGCGCGCTTGAGGTCATCAGCAGCTT    500

BSNT_00564___    501 CGACGAGGTTGATGAAACAAGGATCGGTGTGACAGGAGGAAGCCAAGGCG    550
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03180___ca    501 CGACGAGGTTGACGAAACAAGGATCGGTGTGACAGGAGGAAGCCAAGGCG    550

BSNT_00564___    551 GAGGTTTAACCATTGCCGCAGCAGCGCTGTCAGACATTCCAAAAGCCGCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    551 GAGGTTTAACCATTGCCGCAGCAGCGCTGTCAGACATTCCAAAAGCCGCG    600

BSNT_00564___    601 GTTGCCGATTATCCTTATTTAAGCAACTTCGAACGGGCCATTGATGTGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    601 GTTGCCGATTATCCTTATTTAAGCAACTTCGAACGGGCCATTGATGTGGC    650

BSNT_00564___    651 GCTTGAACAGCCGTACCTTGAAATCAATTCCTTCTTCAGAAGAAATGGCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    651 GCTTGAACAGCCGTACCTTGAAATCAATTCCTTCTTCAGAAGAAATGGCA    700

BSNT_00564___    701 GCCCGGAAACAGAAGTGCAGGCGATGAAGACACTTTCATATTTCGATATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    701 GCCCGGAAACAGAAGTGCAGGCGATGAAGACACTTTCATATTTCGATATT    750

BSNT_00564___    751 ATGAATCTCGCTGACCGAGTGAAGGTGCCTGTCCTGATGTCAATCGGCCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    751 ATGAATCTCGCTGACCGAGTGAAGGTGCCTGTCCTGATGTCAATCGGCCT    800

BSNT_00564___    801 GATTGACAAGGTCACGCCGCCATCCACCGTGTTTGCCGCCTACAATCATT    850
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU03180___ca    801 GATTGACAAGGTCACGCCGCCGTCCACCGTGTTTGCCGCCTACAATCATT    850

BSNT_00564___    851 TGGAAACAGAGAAAGAGCTGAAGGTGTACCGCTACTTCGGACATGAGTAT    900
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03180___ca    851 TGGAAACAAAGAAAGAGCTGAAGGTGTACCGCTACTTCGGACATGAGTAT    900

BSNT_00564___    901 ATCCCTGCTTTTCAAACGGAAAAACTTGCTTTTTTTAAGCAGCATCTTAA    950
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU03180___ca    901 ATCCCTGCTTTTCAAACTGAAAAACTTGCTTTCTTTAAGCAGCATCTTAA    950

BSNT_00564___    951 AGGCTGA    957
                     |||||||
BSU03180___ca    951 AGGCTGA    957


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00564 and BSU03180

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
