Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00563 and BSU03170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:44
# Commandline: needle
# -asequence dna-align/BSNT_00563___ycgK.1.22522.seq
# -bsequence dna-align/BSU03170___ycgK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00563___ycgK-BSU03170___ycgK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00563___ycgK-BSU03170___ycgK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00563___ycgK
# 2: BSU03170___ycgK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity: 957/977 (98.0%)
# Similarity: 957/977 (98.0%)
# Gaps: 4/977 ( 0.4%)
# Score: 4700.0
#
#
#=======================================
BSNT_00563___ 1 ATGGATATTAAAGTGATGGAATATGCAGTGGAAATTGCCCGGCGCCAAAG 50
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU03170___yc 1 ATGGATATTAAAGTGATGGAATATGCAGCGGAAATTGCCCGGCGCCAAAG 50
BSNT_00563___ 51 CTTTACAAAGGCGGCGGAACATCTTCATATCGCACAGCCGTCTCTCAGCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 51 CTTTACAAAGGCGGCGGAACATCTTCATATCGCACAGCCGTCTCTCAGCC 100
BSNT_00563___ 101 AGCAAATCAAAAAGCTTGAGGCTGAGCTGAGGCTTACCCTTTTTCACAGA 150
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU03170___yc 101 AGCAAATCAAAAAGCTTGAGGCTGAGCTGGGGCTTACCCTTTTTCACAGA 150
BSNT_00563___ 151 TCCCATGGCTCTGTTACACTGACACCTCACGGCAGGCGTTTCATTGAAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 151 TCCCATGGCTCTGTTACACTGACACCTCACGGCAGGCGTTTCATTGAAAA 200
BSNT_00563___ 201 AGCCGAGGACATCATTCGTTCCAGAGATGATTTGCTTCGGGAAATGCAGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 201 AGCCGAGGACATCATTCGTTCCAGAGATGATTTGCTTCGGGAAATGCAGG 250
BSNT_00563___ 251 AGAGATCACAGGGAATCGGTCATAAATTATCCATCGGGATTCCTGCTGTG 300
||.||||||||||||||||||||||||||||||||||||||||||||||.
BSU03170___yc 251 AGCGATCACAGGGAATCGGTCATAAATTATCCATCGGGATTCCTGCTGTA 300
BSNT_00563___ 301 ACAGGGAGATATCTCTTTCCTCCGCTGCTGAGGCAGTTTTTGGCGCGCTA 350
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU03170___yc 301 ACAGGGAGATATCTCTTTCCTCCGCTGCTGAAGCAGTTTTTGGCGCGCTA 350
BSNT_00563___ 351 TCCTCATGTGGAGGTTCAGCTTGTTGAAAAAGATCCGGTTTCATTAGAGG 400
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03170___yc 351 TCCTCATGTGGAGGTTCAGCTTGTTGAAAAAGATCCGGTTTCATTAGAGA 400
BSNT_00563___ 401 AGATGACGGCAAAGGGAGAAGTTGACCTTTCTGTTTTATCCTTGCCGATC 450
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03170___yc 401 AGATGACGGCAAAGGGAGAAGTTGACCTTTCTGTTTTATCCTTGCCCATC 450
BSNT_00563___ 451 GAGGATGAACGGCTCTCCATTACACCTTTGCTCACGGAACCGATTGTTCT 500
||||||||||||||||||||||||||.|||||||||||||||.|||||||
BSU03170___yc 451 GAGGATGAACGGCTCTCCATTACACCCTTGCTCACGGAACCGGTTGTTCT 500
BSNT_00563___ 501 CGCAGTGCCGAAGGAAAAACAAAGGTGGATGCCGCCGGAATTGGTCGCGC 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 501 CGCGGTGCCGAAGGAAAAACAAAGGTGGATGCCGCCGGAATTGGTCGCGC 550
BSNT_00563___ 551 TGATTGAGAAAGCGCTGGAAGGTAAG--GAGGGACGCCAGCCGTGTGTGC 598
||||||||||||||||||||| ||| ||||||||||||||||||||||
BSU03170___yc 551 TGATTGAGAAAGCGCTGGAAG--AAGATGAGGGACGCCAGCCGTGTGTGC 598
BSNT_00563___ 599 CGCTTGACATGGTAAGGAACGTGCCCTTTATTCTGTTAAAAGAAGGCTTC 648
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 599 CGATTGACATGGTAAGGAACGTGCCCTTTATTCTGTTAAAAGAAGGCTTC 648
BSNT_00563___ 649 GGTTTTCGCAGGACAGTTCTCGATCTCTGTGCGGAAAGCGGCTTTAAGCC 698
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 649 GGCTTTCGCAGGACAGTTCTCGATCTCTGTGCGGAAAGCGGCTTTAAGCC 698
BSNT_00563___ 699 GAATGCTGCCTTTAAGACGAGCCATATTGAAACCGCCCAATCTCTTGTGG 748
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 699 GAATGCTGCCTTTAAGACGAGCCATATTGAAACCGCCCAATCTCTTGTGG 748
BSNT_00563___ 749 CTAACGGTTTAGGTGTGACAATGGCACCGAATATGGTCAGAAGGGATAAA 798
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 749 CTAACGGATTAGGTGTGACAATGGCACCGAATATGGTCAGAAGGGATAAA 798
BSNT_00563___ 799 GATCCGGGGGTGATCTATTTATCGATTCAATCCGCGCCATCACGAACCCT 848
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03170___yc 799 GATCCGGGTGTGATCTATTTATCGATTCAATCCGCGCCATCACGAACCCT 848
BSNT_00563___ 849 CGTCTTTGTCTTTTTAAAGAACCGCTATGTCAGTCTGACCGCCCAGGCCT 898
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03170___yc 849 CGTCTTTGTCTTTTTAAAGAACCGCTATGTCAGTCTGACGGCCCAGGCCT 898
BSNT_00563___ 899 TTATGGAACTAACCCGGGAAAGTCTTAAACAAACGTTTGATGAAGGCTGT 948
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03170___yc 899 TTATGGAACTAAGCCGGGAAAGTCTTAAACAAACGTTTGATGAAGGCTGT 948
BSNT_00563___ 949 CTGGGAAACAAAGATGAAAATATTTAG 975
|||||||||||||||||||||||||||
BSU03170___yc 949 CTGGGAAACAAAGATGAAAATATTTAG 975
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