Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00545 and BSU03100

See Amino acid alignment / Visit BSNT_00545 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:44
# Commandline: needle
#    -asequence dna-align/BSNT_00545___ycgG.1.22522.seq
#    -bsequence dna-align/BSU03100___ycgG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00545___ycgG-BSU03100___ycgG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00545___ycgG-BSU03100___ycgG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00545___ycgG
# 2: BSU03100___ycgG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 776
# Identity:     751/776 (96.8%)
# Similarity:   751/776 (96.8%)
# Gaps:          16/776 ( 2.1%)
# Score: 3689.0
# 
#
#=======================================

BSNT_00545___      1 TTGAGGTGGATCAATGGTGAATGGGATTTACACCAAAAGTTTTCTGGAAC     50
                                  |||||||||||||||||||||||||||||||||||||
BSU03100___yc      1 -------------ATGGTGAATGGGATTTACACCAAAAGTTTTCTGGAAC     37

BSNT_00545___     51 GTATTCAGG-AGAGCTTCCTGAATGGCAAAGAATCGCTTTTGAGCTGCTG     99
                     ||||||||| ||||||||||||||||||||||||||||||||||||||||
BSU03100___yc     38 GTATTCAGGAAGAGCTTCCTGAATGGCAAAGAATCGCTTTTGAGCTGCTG     87

BSNT_00545___    100 GCAGAAACTCTGGGGGACGACGCGGATACGTTTCCGTGCATTCCCGGACG    149
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU03100___yc     88 GCAGAAACTCTGGGGGACGACGCGGATACATTTCCGTGCATTCCCGGACG    137

BSNT_00545___    150 CCAGGCGTTTCTGACTGATCAGCTTCGGATTGCTTTTGCCGGAGATCCGC    199
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    138 CCAGGCGTTTCTGACTGATCAGCTTCGGATTGCTTTTGCCGGAGATCCGC    187

BSNT_00545___    200 GGGAAAACCGCACAGCGGAGGAACTGGCTCCGTTGCTTGCGGAGTACGGC    249
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    188 GGGAAAACCGCACAGCGGAGGAACTGGCTCCGTTGCTTGCGGAGTACGGC    237

BSNT_00545___    250 AAGATATCGCGGGACACGGGAAAATACGCATCCCTCGTTGTGTTGTTTGA    299
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    238 AAGATATCGCGGGACACGGGAAAATACGCATCCCTCGTTGTGTTGTTTGA    287

BSNT_00545___    300 TACACCGGAAGATTTGGCGGAGCATTATTCGATTGAAGCGTATGAAGAGC    349
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    288 TACACCGGAAGATTTGGCGGAGCATTATTCGATTGAAGCGTATGAAGAGC    337

BSNT_00545___    350 TGTTTTGGCGCTTTTTAAATAGACTGAGTCATCAAGACGAAAAAGAATGG    399
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    338 TGTTTTGGCGCTTTTTAAATAGACTGAGTCATCAAGACGAAAAAGAATGG    387

BSNT_00545___    400 CCGGAAGACATTCCGGCCGATCCCGAGCATTATAAATGGGAGTTTTGTTT    449
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU03100___yc    388 CCGGAAGACATTCCGGCCGATCCTGAGCATTATAAATGGGAGTTTTGTTT    437

BSNT_00545___    450 TGACGGCGAGCCGTACTTTC-TTCTCTGCGCTACACCGGCGCACGAGGCG    498
                     ||||||||||||||| |||| ||||.|||||||||||||.|||||||||.
BSU03100___yc    438 TGACGGCGAGCCGTA-TTTCATTCTGTGCGCTACACCGGGGCACGAGGCA    486

BSNT_00545___    499 AGAAAAAGCCGAAGCTTTCCTTTTTTTATGATCACGTTTCAGCCAAGGTG    548
                     ||||.||||||.||||||||||||||||||.|||||||||||||||||||
BSU03100___yc    487 AGAAGAAGCCGGAGCTTTCCTTTTTTTATGGTCACGTTTCAGCCAAGGTG    536

BSNT_00545___    549 GGTGTTTGAGGACCTAAATGGATCAACTGCATTTGGCCGTAACATGAGCA    598
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    537 GGTGTTTGATGACCTAAATGGATCAACTGCATTTGGCCGTAACATGAGCA    586

BSNT_00545___    599 GGCTGATCCGATCTCGTTTAGAGGCCTATGATCAGGCTCCGATTCACCCG    648
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    587 GGCTGATCCGATCTCGTTTAGAGGCCTATGATCAGGCTCCGATTCACCCG    636

BSNT_00545___    649 CAATTAGGCTGGTACGGAGGAAAAGATAATCGTGAATGGAAGCAGTATTT    698
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    637 CAATTAGGCTGGTACGGAGGAAAAGATAATCGTGAATGGAAGCAGTATTT    686

BSNT_00545___    699 CCTCCGTGATGACGAAAAACAGGTATCGAAGTGCCCGTTTTCTTATTTAA    748
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03100___yc    687 CCTCCGTGATGACGAAAAACAGGTATCGAAGTGCCCGTTTTCTTATTTAA    736

BSNT_00545___    749 AGAACATGTTCAACAAAATGAAATAA    774
                     ||||||||||||||||||||||||||
BSU03100___yc    737 AGAACATGTTCAACAAAATGAAATAA    762


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00545 and BSU03100

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
