Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00543 and BSU03060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:43
# Commandline: needle
# -asequence dna-align/BSNT_00543.1.22522.seq
# -bsequence dna-align/BSU03060___lctP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00543-BSU03060___lctP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00543-BSU03060___lctP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00543
# 2: BSU03060___lctP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1626
# Identity: 1205/1626 (74.1%)
# Similarity: 1205/1626 (74.1%)
# Gaps: 405/1626 (24.9%)
# Score: 5947.5
#
#
#=======================================
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 1 ATGTGGGAGCAGTTGTATGATCCGTTTGGAAACGAGTATGTGAGCGCACT 50
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 51 TGTGGCGCTCACTCCGATTCTCTTTTTTCTTTTGGCTTTAACTGTTTTGA 100
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 101 AAATGAAAGGCATTCTTGCGGCATTTCTTACCCTAGCCGTCAGTTTCTTC 150
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 151 GTCTCCGTTTGGGCATTTCATATGCCGGTTGAAAAAGCGATTTCTTCTGT 200
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 201 TTTGTTAGGAATCGGGAGCGGGCTGTGGCCCATTGGCTACATCGTCCTGA 250
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 251 TGGCGGTGTGGCTGTATAAAATCGCCGTGAAAACCGGGAAATTTACCATT 300
BSNT_00543 0 -------------------------------------------------- 0
BSU03060___lc 301 ATTCGGTCCAGCATTGCCGGCATTTCGCCTGACCAACGATTACAGCTATT 350
BSNT_00543 1 -----------------------------------------------TTG 3
|||
BSU03060___lc 351 ATTAATTGGTTTTTGTTTTAACGCGTTTTTAGAAGGCGCGGCCGGTTTTG 400
BSNT_00543 4 GTGTTCCGATTG--------GCGGCGCTGCTCGTCGAACTTGGTTTTAAA 45
|||||||||||| ||||||||||||||||||||||||||||||
BSU03060___lc 401 GTGTTCCGATTGCGATTAGTGCGGCGCTGCTCGTCGAACTTGGTTTTAAA 450
BSNT_00543 46 CCGTTAAAAGCGGCAGCGCTCTGCTTGATTGCAAACGCAGCCTCCGGAGC 95
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU03060___lc 451 CCGTTAAAAGCGGCGGCGCTCTGCTTGATTGCAAACGCTGCCTCCGGAGC 500
BSNT_00543 96 CTTTGGGGCGATCGGAATTCCTGTCATCACAGGGGCACAGATTGGTAATT 145
||||||||||||.||.||||||||||||||||||||.|||||||||.|||
BSU03060___lc 501 CTTTGGGGCGATTGGGATTCCTGTCATCACAGGGGCGCAGATTGGTGATT 550
BSNT_00543 146 TGTCTGCTCTTGAGCTGTCACGGACATTAATGTGGACACTGCCGATGATC 195
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU03060___lc 551 TGTCTGCTCTTGAGCTGTCTCGGACATTAATGTGGACACTGCCGATGATC 600
BSNT_00543 196 TCATTTTTAATACCATTCCTGCTTGTATTCTTATTAGACCGAATGAAAGG 245
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 601 TCATTTTTAATACCATTCCTGCTTGTATTCTTATTAGACCGAATGAAAGG 650
BSNT_00543 246 AATCAAACAGACATGGCCCGCTCTTCTGGTTGTGAGCGGTGGGTATACAG 295
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 651 AATCAAACAGACATGGCCCGCTCTTCTGGTTGTGAGCGGTGGGTATACAG 700
BSNT_00543 296 CGGTTCAGACACTGACAATGGCGGTGCTCGGGCCGGAATTAGCAAACATT 345
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 701 CGGTTCAGACACTGACAATGGCGGTGCTCGGGCCGGAATTAGCAAACATT 750
BSNT_00543 346 TTGGCGGCCTTATTCAGCATGGGCGGGCTTGCCCTCTTCCTCCGCAAATG 395
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 751 TTGGCGGCCTTATTCAGCATGGGCGGGCTTGCCCTCTTCCTCCGCAAATG 800
BSNT_00543 396 GCAGCCGAAAGAGATTTACCGCGAGGAAGGGGCCGGCGATGCTGGTGAGA 445
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 801 GCAGCCGAAAGAGATTTACCGCGAGGAAGGGGCCGGCGATGCTGGTGAGA 850
BSNT_00543 446 AAAAGGCATACCGTGCTGCTGATATTGCGAAAGCGTGGTCTCCTTTCTAC 495
||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU03060___lc 851 AAAAGGCATACCGTGCCGCTGACATTGCGAAAGCGTGGTCTCCTTTCTAC 900
BSNT_00543 496 ATTTTAACTGCGGCGATCACCATCTGGAGCCTTCCTGCCTTCAAAGCGCT 545
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 901 ATTTTAACTGCGGCGATCACCATCTGGAGCCTTCCTGCCTTCAAAGCGCT 950
BSNT_00543 546 TTTCCAAGAAGGCGGGCTGTTATATCAATCAACGCTCCTGTTCAAAATGC 595
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 951 TTTCCAAGAAGGCGGGCTGTTATATCAATCAACGCTCCTGTTCAAAATGC 1000
BSNT_00543 596 CTTTTCTGCATCAGCAAATTATGAAAATGCCGCCGATTGCGCCATCTGCC 645
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1001 CTTTTCTGCATCAGCAAATTATGAAAATGCCGCCGATTGCGCCATCTGCC 1050
BSNT_00543 646 ATGCCGTTAGATGCAGTCTTTAAAGTTGATCTGCTGTCAGCGACTGGAAC 695
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU03060___lc 1051 ATGCCGTTAGATGCAGTCTTTAAAGTTGATCTGCTGTCAGCGACTGGTAC 1100
BSNT_00543 696 ATCGATTTTAGCGGCGGTCATCGTGACAGGGCTGTTCAGCAAAAATTTCT 745
|.|||||||||||||||||||||||||||||||||||||||||||.||||
BSU03060___lc 1101 AGCGATTTTAGCGGCGGTCATCGTGACAGGGCTGTTCAGCAAAAAGTTCT 1150
BSNT_00543 746 CTTGTCGGGATGCCTTTGCTTCCTTGAAGGAGACAGGAAAAGAGCTGTGG 795
|.|.||||||||||||||||||||||||||||||.|||||||||||||||
BSU03060___lc 1151 CCTCTCGGGATGCCTTTGCTTCCTTGAAGGAGACGGGAAAAGAGCTGTGG 1200
BSNT_00543 796 GTGCCGATTATGACGATCTGCTTCGTGATGGGGTTTGCCAATCTGGCCAA 845
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1201 GTGCCGATTATGACGATCTGCTTCGTGATGGGGTTTGCCAATCTGGCCAA 1250
BSNT_00543 846 CTTCGCAGGGCTCAGCTCTTCAATTGGGTTAGCATTGGCGAAAACAGGAG 895
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1251 CTTCGCAGGGCTCAGCTCTTCAATTGGGTTAGCATTGGCGAAAACAGGAG 1300
BSNT_00543 896 ACCTGTTCCCGTTTGTCAGTCCTGTTCTCGGCTGGATTGGCGTGTTCATC 945
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1301 ACCTGTTCCCGTTTGTCAGTCCTGTTCTCGGCTGGATTGGCGTGTTCATC 1350
BSNT_00543 946 ACCGGTTCTGTTGTCAGCAATAATGCTTTGTTCGGCCATTTGCAGGTTGT 995
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1351 ACCGGTTCTGTTGTCAGCAATAATGCTTTGTTCGGCCATTTGCAGGTTGT 1400
BSNT_00543 996 CACGGGAGCGCAGATCGGTGCGGGTTCAGATTTGCTGTTAGCCGCAAATA 1045
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1401 CACGGGAGCGCAGATCGGTGCGGGTTCAGATTTGCTGTTAGCCGCAAATA 1450
BSNT_00543 1046 CGGCGGGCGGTGTCATGGCGAAACTTGTTTCTCCTCAATCTATCGCCATC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1451 CGGCGGGCGGTGTCATGGCGAAACTTGTTTCTCCTCAATCTATCGCCATC 1500
BSNT_00543 1096 GCTGCCGCAGCGGTCGGCCAAACAGGCAAGGAATCTAAACTGTTTAAAAG 1145
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc 1501 GCTGCCGCAGCGGTCGGCCAAACAGGCAAGGAATCTAAACTGTTTAAAAG 1550
BSNT_00543 1146 GACAGTGGCGTACAGCCTGATTCTGTTATTGATCATTTGTATATGGATGT 1195
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU03060___lc 1551 GACAGTGGCGTACAGCCTGATTCTGTTATTGATCATTTGTATATGGACGT 1600
BSNT_00543 1196 TTATTCTTGCAAGATTAGGAGTGTAA 1221
||||||||||||||||||||||||||
BSU03060___lc 1601 TTATTCTTGCAAGATTAGGAGTGTAA 1626
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