Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00535 and BSU03030

See Amino acid alignment / Visit BSNT_00535 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:43
# Commandline: needle
#    -asequence dna-align/BSNT_00535.1.22522.seq
#    -bsequence dna-align/BSU03030___ycgB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00535-BSU03030___ycgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00535-BSU03030___ycgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00535
# 2: BSU03030___ycgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     490/582 (84.2%)
# Similarity:   490/582 (84.2%)
# Gaps:          90/582 (15.5%)
# Score: 2428.0
# 
#
#=======================================

BSNT_00535         1 ATGAATAATCTGCATAATAGACTTTCAGGCGTGAATGGGAAAAATAAGAG     50
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU03030___yc      1 ATGAATAATCTGCGTAATAGACTTTCAGGCGTGAATGGGAAAAATAAGAG     50

BSNT_00535        51 GGTAAAAGAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGG    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc     51 AGTAAAAGAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGG    100

BSNT_00535       101 GAGCATTTGCGCTGCTTGATGTGATCATCCGCGGCATTATGTTTGAATTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    101 GAGCATTTGCGCTGCTTGATGTGATCATCCGCGGCATTATGTTTGAATTT    150

BSNT_00535       151 CCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTCATCATTATCTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    151 CCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTCATCATTATCTT    200

BSNT_00535       201 ATATTACTGCATCAGGGCTGCGGCATCCGGAATGCTCATGCCGAGAATAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    201 ATATTACTGCATCAGGGCTGCGGCATCCGGAATGCTCATGCCGAGAATAG    250

BSNT_00535       251 ACACCAAAGAAGAACTGCAAAAACGGGTGAAGCAGCAGCGAATAGAATCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    251 ACACCAAAGAAGAACTGCAAAAACGGGTGAAGCAGCAGCGAATAGAATCA    300

BSNT_00535       301 ATTGCGGTCGCCTTTGCGGTAGTGGTGCTTACGATGTACGACAGGGGGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    301 ATTGCGGTCGCCTTTGCGGTAGTGGTGCTTACGATGTACGACAGGGGGAT    350

BSNT_00535       351 TCCCCATACATTCTTCGCTTGGCTGAAAATGATTCTTCTTTTTATCGTCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    351 TCCCCATACATTCTTCGCTTGGCTGAAAATGATTCTTCTTTTTATCGTCT    400

BSNT_00535       401 GCGGCGGCGTTCTGTTTCTGCTTCGGTATGTGATTGTGAAGCTGGCTTAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03030___yc    401 GCGGCGGCGTTCTGTTTCTGCTTCGGTATGTGATTGTGAAGCTGGCTTAC    450

BSNT_00535       451 AGAAGAGCGGTAAAAGAAGAAATAAAAAAGAAATCATCTT---------G    491
                     ||||||||||||||||||||||||||||||||||||||||         |
BSU03030___yc    451 AGAAGAGCGGTAAAAGAAGAAATAAAAAAGAAATCATCTTTTTTGTTTGG    500

BSNT_00535       492 A-------------------------------------------------    492
                     |                                                 
BSU03030___yc    501 AAAGCGAGGGAAGCGTTCACAGTTTCGGGCAGCTTTTTTTATAGGAACAT    550

BSNT_00535       492 --------------------------------    492
                                                     
BSU03030___yc    551 TGATTTGTATTCACTCTGCCAAGTTGTTTTGA    582


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