Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00531 and BSU03010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:42
# Commandline: needle
# -asequence dna-align/BSNT_00531___amhX.1.22522.seq
# -bsequence dna-align/BSU03010___amhX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00531___amhX-BSU03010___amhX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00531___amhX-BSU03010___amhX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00531___amhX
# 2: BSU03010___amhX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1157
# Identity: 1111/1157 (96.0%)
# Similarity: 1111/1157 (96.0%)
# Gaps: 10/1157 ( 0.9%)
# Score: 5399.0
#
#
#=======================================
BSNT_00531___ 1 ATGCAAAAGCTTTCAGAAGACATGAAACAAACCATTATGGACATCTTCGA 50
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU03010___am 1 ATGCAAAAGCTTTCAGAAGAAATGAAACAAACCATTATGGACATCTTCGA 50
BSNT_00531___ 51 GCATCTGCACGCGAATCCTGAAGTCAGCTGGAAGGAATATGAGACAACTT 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU03010___am 51 GCATCTGCACGCGAACCCTGAAGTCAGCTGGAAGGAATATGAGACAACTT 100
BSNT_00531___ 101 CATTTTTGAAACAAAAGCTTGAGGATTTAGGGTGCCGGACGCGCACGTTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 101 CATTTTTGAAACAAAAGCTTGAGGATTTAGGGTGCCGGACGCGCACGTTT 150
BSNT_00531___ 151 TCAGACTGCACCGGGGTTGTCGGCGAAATCGGCTCAGGCTCACCTGTTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 151 TCAGACTGCACCGGGGTTGTCGGCGAAATCGGCTCAGGCTCACCTGTTGT 200
BSNT_00531___ 201 AGCGGTACGCGCTGATATTGACGCGCTGTGGCAGGAGGTTAACGGCACAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 201 AGCGGTACGCGCTGATATTGACGCGCTGTGGCAGGAGGTTAACGGCACAT 250
BSNT_00531___ 251 TTCGCGCCAACCATTCCTGCGGACACGATTCACATATGACAATGGCATTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 251 TTCGCGCCAACCATTCCTGCGGACACGATTCACATATGACAATGGCATTG 300
BSNT_00531___ 301 GGCACGTTAATGCTGCTAAAAAAACAACCTGAGCTTCCGAAGGGTACAAT 350
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU03010___am 301 GGCACGTTAATGCTGCTAAAAAAACAACCTGAGCTTCCGAAGGGCACAAT 350
BSNT_00531___ 351 CCGTTTTATCTTTCAGCCGGCAGAAGAAAAAGGCGGCGGCGCCTTGAAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 351 CCGTTTTATCTTTCAGCCGGCAGAAGAAAAAGGCGGCGGCGCCTTGAAAA 400
BSNT_00531___ 401 TGATAGAAGAAGGCGTGCTTGATGATATCGACTATTTGTATGGCGTTCAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 401 TGATAGAAGAAGGCGTGCTTGATGATATCGACTATTTGTATGGCGTTCAC 450
BSNT_00531___ 451 GTCCGTCCGATCCAGGAAACACAAAACGGCCGCTGCGCTCCGTCTATTCT 500
|||||||||||||||||||||||.|||||||||||||||||.||||||||
BSU03010___am 451 GTCCGTCCGATCCAGGAAACACAGAACGGCCGCTGCGCTCCTTCTATTCT 500
BSNT_00531___ 501 GCACGGATCAAGCCAGCACATTGAGGGAACGATCATCGGGGAAGAGACTC 550
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03010___am 501 GCACGGATCAAGCCAGCACATTGAGGGAACGATCATCGGGGAAGAGGCTC 550
BSNT_00531___ 551 ATGGCGCCCGTCCGCACCTCGGGAAAAACAGCATTGAAATTGCGGCATTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 551 ATGGCGCCCGTCCGCACCTCGGGAAAAACAGCATTGAAATTGCGGCATTT 600
BSNT_00531___ 601 CTTGTACATAAGCTCGGACTCATTCATATTGACCCGCAAATCCCGCATAC 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03010___am 601 CTTGTACACAAGCTCGGACTCATTCATATTGACCCGCAAATCCCGCATAC 650
BSNT_00531___ 651 CGTCAAAATGACAAAACTTCAAGCCGGCGGTGAAAGCTCTAACATCATTC 700
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03010___am 651 CGTCAAAATGACAAAACTGCAAGCCGGCGGTGAAAGCTCTAACATCATTC 700
BSNT_00531___ 701 CAGGAAAAGCATCGTTCAGCCTTGATTTGCGCGCACAGACCAATGAAGCC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 701 CAGGAAAAGCATCGTTCAGCCTTGATTTGCGCGCACAGACCAATGAAGCC 750
BSNT_00531___ 751 ATGGAGGCGTTAATCGCCGAGACAGAAAGAGCCTGTGAAGCGGCCGCCGC 800
||||||||.|||||||||||.|||||||||||||||||||||||||||||
BSU03010___am 751 ATGGAGGCATTAATCGCCGAAACAGAAAGAGCCTGTGAAGCGGCCGCCGC 800
BSNT_00531___ 801 TGCATTCGGCGCAAAAATCGATCTGCAAAAAGAACACAGCCTTCCTGCGG 850
||||||.||||||||.|||||.|||||.||||||||||||||||||||||
BSU03010___am 801 TGCATTTGGCGCAAAGATCGAGCTGCACAAAGAACACAGCCTTCCTGCGG 850
BSNT_00531___ 851 CAACACAAAACAAAGAAGCTGAAGCGATCATGGCAGAAGCCATTACAGAT 900
||||||||||.|||||||||||||||||||||||||||||||||||.||.
BSU03010___am 851 CAACACAAAATAAAGAAGCTGAAGCGATCATGGCAGAAGCCATTACGGAA 900
BSNT_00531___ 901 ATCATCGGGGCTGAGCGGCTTGATGACCCGCTTGTCACTACCGGCGGAGA 950
||||||||||||||||||||||||||||||||||||||.||||||||.||
BSU03010___am 901 ATCATCGGGGCTGAGCGGCTTGATGACCCGCTTGTCACCACCGGCGGCGA 950
BSNT_00531___ 951 GGATTTCCATTTTTACGCCGTGAAGGTGCCGAATCTGAAAACAACGATGC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03010___am 951 GGATTTCCATTTTTACGCCGTGAAGGTGCCGAATCTGAAAACAACGATGC 1000
BSNT_00531___ 1001 TCGGACTAGGCTGCGGGCTCCAGCCGGGACTCCATCATCCGCACATGACA 1050
||||||||||||||||||||||||||||.||||||||||||||||||||.
BSU03010___am 1001 TCGGACTAGGCTGCGGGCTCCAGCCGGGGCTCCATCATCCGCACATGACC 1050
BSNT_00531___ 1051 TTTGACAGAAATGCGATGTTCAACGGCATTCACATTTTAGCGAATGCCGT 1100
||||||||||||||||||||.|.|||||||||.|||||.|||||.|||||
BSU03010___am 1051 TTTGACAGAAATGCGATGTTTACCGGCATTCATATTTTGGCGAACGCCGT 1100
BSNT_00531___ 1101 ATTAAAAACTTTTCAAAAGGCTGATTCACCCGCTGCCGCTTACG-----T 1145
..|.|||||.|||||.|||||.||.||||..|||||||||.||| |
BSU03010___am 1101 GCTCAAAACATTTCAGAAGGCGGAATCACTTGCTGCCGCTAACGCTTCTT 1150
BSNT_00531___ 1146 AAAATAA 1152
||
BSU03010___am 1151 AA----- 1152
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