Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00516 and BSU02920

See Amino acid alignment / Visit BSNT_00516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:40
# Commandline: needle
#    -asequence dna-align/BSNT_00516___yceF.1.22522.seq
#    -bsequence dna-align/BSU02920___yceF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00516___yceF-BSU02920___yceF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00516___yceF-BSU02920___yceF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00516___yceF
# 2: BSU02920___yceF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     768/774 (99.2%)
# Similarity:   768/774 (99.2%)
# Gaps:           0/774 ( 0.0%)
# Score: 3816.0
# 
#
#=======================================

BSNT_00516___      1 TTGGACTTTTTACATCATATTTTGTCTACGTATGCTTCATTTTTCGATTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc      1 TTGGACTTTTTACATCATATTTTGTCTACGTATGCTTCATTTTTCGATTG     50

BSNT_00516___     51 GAAAATGTGGGGGGAAGTTCTGACGGATCCTGTTTCCTGGGGTTTGATCG    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU02920___yc     51 GAAAATGTGGGGGGAAGTTCTGACTGATCCTGTTTCCTGGGGTTTGATCG    100

BSNT_00516___    101 GTTCCCTTGTTGTTCTGGAAGGCCTTTTATCGGCCGATAACGCGCTTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    101 GTTCCCTTGTTGTTCTGGAAGGCCTTTTATCGGCCGATAACGCGCTTGTT    150

BSNT_00516___    151 CTTGCGGTCATGGTTAAACACCTGCCGGAAAAACAGCGGAAAAAAGCGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    151 CTTGCGGTCATGGTTAAACACCTGCCGGAAAAACAGCGGAAAAAAGCGTT    200

BSNT_00516___    201 AACGTATGGTTTGTTTGGAGCTTATATTTTCAGGTTTATTTTTATCGGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU02920___yc    201 AACGTATGGTTTGTTTGGAGCTTATATTTTCAGGTTTATTTTCATCGGGC    250

BSNT_00516___    251 TCGGTATGCTTCTCATTAAATTCTGGTGGATCAAGGTGCTTGGCGCGCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    251 TCGGTATGCTTCTCATTAAATTCTGGTGGATCAAGGTGCTTGGCGCGCTT    300

BSNT_00516___    301 TACCTGGCTTGGCTCGTCATTAAGCACTTCTGGATAGGCGAAAAAGAAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    301 TACCTGGCTTGGCTCGTCATTAAGCACTTCTGGATAGGCGAAAAAGAAGA    350

BSNT_00516___    351 GGAAGCGGACGGCATCAAGAAAAACTCTTGGATGGTCCGCACGTTCGGGA    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU02920___yc    351 GGAAGCGGACGGCATGAAGAAAAACTCTTGGATGGTCCGCACGTTCGGGA    400

BSNT_00516___    401 TCTTCTGGGCGACTGTCATTTCAGTAGAATTAATGGATCTTGCCTTCTCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    401 TCTTCTGGGCGACTGTCATTTCAGTAGAATTAATGGATCTTGCCTTCTCT    450

BSNT_00516___    451 GTGGACAGCATCCTGGCCGCGTTTGCAGTATCTGAAAAAGTATGGGTGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    451 GTGGACAGCATCCTGGCCGCGTTTGCAGTATCTGAAAAAGTATGGGTGCT    500

BSNT_00516___    501 TCTGATCGGCGGTATGCTTGGTATTTTAATGATGCGTACAGTGGCAAAAG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    501 TCTGATTGGCGGTATGCTTGGTATTTTAATGATGCGTACAGTGGCAAAAG    550

BSNT_00516___    551 TGTTCCTTGTGCTGATTGATAAAATTCCTGAGCTGGAAAACACAGCATTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    551 TGTTCCTTGTGCTGATTGATAAAATTCCTGAGCTGGAAAACACAGCATTC    600

BSNT_00516___    601 GTGTTAATCGGCATTATCGCGCTGAAAATGGCGGGGAGCGCTTTCCATTA    650
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    601 GTCTTAATCGGCATTATCGCGCTGAAAATGGCGGGGAGCGCTTTCCATTA    650

BSNT_00516___    651 CGAAATGCCGCACTCTGTATTCTTCATCATCATTATCGCTGCATTTGCGG    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU02920___yc    651 CGAAATGCCGCACTCTGTATTCTTCATTATCATTATCGCTGCATTTGCGG    700

BSNT_00516___    701 TAACATTGATCATTCACTACATCAATAAACAAAAGCAGGTGCGCGAACAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02920___yc    701 TAACATTGATCATTCACTACATCAATAAACAAAAGCAGGTGCGCGAACAA    750

BSNT_00516___    751 ACAGCCGCTTCAAAAGAAGAATAA    774
                     ||||||||||||||||||||||||
BSU02920___yc    751 ACAGCCGCTTCAAAAGAAGAATAA    774


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