Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00494 and BSU02790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:38
# Commandline: needle
# -asequence dna-align/BSNT_00494___ycdB.1.22522.seq
# -bsequence dna-align/BSU02790___ycdB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00494___ycdB-BSU02790___ycdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00494___ycdB-BSU02790___ycdB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00494___ycdB
# 2: BSU02790___ycdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1422
# Identity: 1383/1422 (97.3%)
# Similarity: 1383/1422 (97.3%)
# Gaps: 3/1422 ( 0.2%)
# Score: 6760.0
#
#
#=======================================
BSNT_00494___ 1 ATGAAAGGGGCCGCCTTTGTGAAGAAAGAGGGACTGAAACAAAAAGCACT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 1 ATGAAAGGGGCCGCCTTTGTGAAGAAAGAGGGACTGAAACAAAAAGCACT 50
BSNT_00494___ 51 GGAAATCGGCCGGGTGCCGACACACTTAAAACTGGAAATTGAAGATTATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 51 GGAAATCGGCCGGGTGCCGACACACTTAAAACTGGAAATTGAAGATTATG 100
BSNT_00494___ 101 GCAGTGATGACAAAAGAGCCTATTTTTGTTGGACAGATCCTCAGGATGAG 150
||.|||||||.||||||||..|||||||||||.|||||||||||||||||
BSU02790___yc 101 GCGGTGATGATAAAAGAGCTCATTTTTGTTGGGCAGATCCTCAGGATGAG 150
BSNT_00494___ 151 AATATCGGCATTATCGTGGAACTTGGACCGGACGGGGAGCTGGAATCCCT 200
||||.|||||||||||||||.||||||||||||||.||||||||||||||
BSU02790___yc 151 AATACCGGCATTATCGTGGAGCTTGGACCGGACGGAGAGCTGGAATCCCT 200
BSNT_00494___ 201 TTCCCGTGATATTGAGCCTGAAAGCGGAAAAAGGCTGTCTGAGGAGAAAC 250
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU02790___yc 201 TTCCCGTGATATTGAGCCTGAAAGCGGAGAAAGGCTGTCTGAGGAGAAAC 250
BSNT_00494___ 251 TAGAGGATATCATGCGCCAATTTGTCGAGACTCATCATCCGGGGGCACTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 251 TAGAGGATATCATGCGCCAATTTGTCGAGACTCATCATCCGGGGGCACTC 300
BSNT_00494___ 301 TCTGCCTTTGTTCGTGAAGAAAATGACCATGCATACGGCGATAAAGTGAG 350
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU02790___yc 301 TCTGCCTTTGTTCGTGAAGAAAATGACCGTGCATACGGCGATAAAGTGAG 350
BSNT_00494___ 351 ATTTTCATATGTTCAAATGGAGGCTGGGCTTCCTCTCCCCATGAGCGGAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 351 ATTTTCATATGTTCAAATGGAGGCTGGGCTTCCTCTCCCCATGAGCGGAT 400
BSNT_00494___ 401 TTATGGCTGATGTTTCCTTATCAGGTGAGATCGTTTATTTCCGCTATTAC 450
|||||||||||||||||||||||||||||||.|||||.|||||.||||||
BSU02790___yc 401 TTATGGCTGATGTTTCCTTATCAGGTGAGATTGTTTACTTCCGTTATTAC 450
BSNT_00494___ 451 GGCGAAGCGGGCAGCATCATCAAGCCAAAGAGGGTCGCGGATGTTGAAGA 500
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02790___yc 451 GGCGAAGCGGGCAGCATCATCAAGCCAAAGCGGGTCGCGGATGTTGAAGA 500
BSNT_00494___ 501 GGCACTTGCCTTTATCAAGAAGGACGTGGAGTTCGACCTTTTGTTTGAGG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 501 GGCACTTGCCTTTATCAAGAAGGACGTGGAGTTCGACCTTTTGTTTGAGG 550
BSNT_00494___ 551 TTCTCCATCGTTCTGTTTACAAAAACGGAGATGATCAGCCGCATTTGGTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 551 TTCTCCATCGTTCTGTTTACAAAAACGGAGATGATCAGCCGCATTTGGTG 600
BSNT_00494___ 601 TATGAGCCTGAATGCAGGGCGATTACCGTACCTGCGGATTTGGTTCAAGA 650
||.|||||||||.|.|||||||||||||||||||||||||||||||||||
BSU02790___yc 601 TACGAGCCTGAAGGTAGGGCGATTACCGTACCTGCGGATTTGGTTCAAGA 650
BSNT_00494___ 651 AGAACAAGGAGGAGTTGATAATGACGATGATTACAGGGAGCCGGAGAGCT 700
|||||| ||.|||||||.||||||||||||||||||||||||||||||
BSU02790___yc 651 AGAACA---AGCAGTTGATGATGACGATGATTACAGGGAGCCGGAGAGCT 697
BSNT_00494___ 701 TTCCTCTCCCTTTATTCGAGGGCATCCGCGAAAAGGCCGATCCTGACAGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 698 TTCCTCTCCCTTTATTCGAGGGCATCCGCGAAAAGGCCGATCCTGACAGC 747
BSNT_00494___ 751 ATGATTGGTATTGAAAATGGGTTTGTCAAAGAGCGGGAAGCGGATTTGGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 748 ATGATTGGTATTGAAAATGGGTTTGTCAAAGAGCGGGAAGCGGATTTGGG 797
BSNT_00494___ 801 AGATGGGAGAATCGGAATCGTTTGGCGGAATCCGGATGACCCTGTGTATC 850
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU02790___yc 798 AGATGGGAGAATTGGAATCGTTTGGCGGAATCCGGATGACCCTGTGTATC 847
BSNT_00494___ 851 AGCCGGCGGATAAAAGCATGGACAGCTGGTTTAAGGGACGGACTCATCAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 848 AGCCGGCGGATAAAAGCATGGACAGCTGGTTTAAGGGACGGACTCATCAA 897
BSNT_00494___ 901 GTGCTGAAAACCATCTATAACAAAGAAACAGGAAAACTCGAAGGCGTCAT 950
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU02790___yc 898 GTGCTGAAAACCATCTATAACAAAGAAACCGGAAAACTCGAAGGCGTCAT 947
BSNT_00494___ 951 GTCATTTATGGAGAAAAAAGGGCCGCTGACAGTAACCTTGGCAGAGTGTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 948 GTCATTTATGGAGAAAAAAGGGCCGCTGACAGTAACCTTGGCAGAGTGTG 997
BSNT_00494___ 1001 AAAAAATCGCGCTTCGCTTTCTATTTGCTTTATTTCCGAATGCCGATCAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 998 AAAAAATCGCGCTTCGCTTTCTATTTGCTTTATTTCCGAATGCCGATCAA 1047
BSNT_00494___ 1051 TATTTTAGGATCAGATACGACGAAAAAGATGAAGAAGAAAACGCAGTCGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02790___yc 1048 TATTTTAGGATCAGATACGACGAAAAAGATGAAGAAGAAAACGCAGTCGC 1097
BSNT_00494___ 1101 TGGTTTTACGTTTGAAGCGCATTGTCACGGAGTTCCGATCCGATTTGGGC 1150
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU02790___yc 1098 TGGTTTTACGTTTGAAGCGCATTGTCACGGAGTTCCGCTCCGATTTGGGC 1147
BSNT_00494___ 1151 AGATCAGAATTTGTGTCAGCCGCCAGACAGGGGATATCACCGTTTATATG 1200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU02790___yc 1148 AGATCAGAATTTGTGTCAGCCGCCAGACAGGGTATATCACCGTTTATATG 1197
BSNT_00494___ 1201 GGACCGGATATTGACCCAAATAAGCTGGCAGCCATTGATCCCATTCCGGC 1250
||||||||||||||||||||||||||||||.||||||||||..|.|||||
BSU02790___yc 1198 GGACCGGATATTGACCCAAATAAGCTGGCAACCATTGATCCTGTGCCGGC 1247
BSNT_00494___ 1251 CATTTCAGTTGAACAAGCCAAGGCTATCTTTTGGCAGCATTTTAAAGTTG 1300
.|||||||||||||||||||||.|||||||||||||||||||||||||||
BSU02790___yc 1248 TATTTCAGTTGAACAAGCCAAGTCTATCTTTTGGCAGCATTTTAAAGTTG 1297
BSNT_00494___ 1301 AGCTTGGCTGGGAAAGAGAGTACGGAGATGATGAAGAACACAGCTACCGG 1350
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU02790___yc 1298 AGCTTGGCTGGGAAAGAGAGTACGGGGATGATGAAGAACACAGCTACCGG 1347
BSNT_00494___ 1351 CTCGTCTATAAGCCGGTGTTTCCGCGTTTTATCGATGCACATACAGGAGA 1400
|||||||||||||||||||.|||||.|||||||||||||||||||||.||
BSU02790___yc 1348 CTCGTCTATAAGCCGGTGTATCCGCATTTTATCGATGCACATACAGGGGA 1397
BSNT_00494___ 1401 GCCTGTCTTCAGCTCATGGTAA 1422
|||||||||||||..|||||.|
BSU02790___yc 1398 GCCTGTCTTCAGCATATGGTGA 1419
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