Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00492 and BSU02780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:38
# Commandline: needle
# -asequence dna-align/BSNT_00492___ycdA.1.22522.seq
# -bsequence dna-align/BSU02780___ycdA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00492___ycdA-BSU02780___ycdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00492___ycdA-BSU02780___ycdA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00492___ycdA
# 2: BSU02780___ycdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1083
# Identity: 1055/1083 (97.4%)
# Similarity: 1055/1083 (97.4%)
# Gaps: 18/1083 ( 1.7%)
# Score: 5225.0
#
#
#=======================================
BSNT_00492___ 1 TTGAGGAGGAAAAATGAATGTTTCAGAAAAAAAACGTACGCTGTTTTCCT 50
||||||||| |||||||||||||||||||||||
BSU02780___yc 1 -----------------ATGTTTCAG-AAAAAAACGTACGCTGTTTTCCT 32
BSNT_00492___ 51 AATTCTTCTGCTGATGATGTTTACAGCTGCTTGTTCCGGCAGCAAAACAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 33 AATTCTTCTGCTGATGATGTTTACAGCTGCTTGTTCCGGCAGCAAAACAA 82
BSNT_00492___ 101 GCGCGGAGAAGAAAGAATCAGAAACAGAAAAAAGCTCAGATATAGCTCAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 83 GCGCGGAGAAGAAAGAATCAGAAACAGAAAAAAGCTCAGATATAGCTCAA 132
BSNT_00492___ 151 GTCAAAATCAAGGATGTCTCTTATACGCTTCCGTCTAAATATGATAAGTC 200
|||||||||||||||||||||||.||.|||||||||||||||||||||||
BSU02780___yc 133 GTCAAAATCAAGGATGTCTCTTACACACTTCCGTCTAAATATGATAAGTC 182
BSNT_00492___ 201 CACTTCAGATGACCAGCTTGTGTTAAAAGTCAATGTCGCGGTGAAAAACA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 183 CACTTCAGATGACCAGCTTGTGTTAAAAGTCAATGTCGCGGTGAAAAACA 232
BSNT_00492___ 251 CAGGAAAAGACCCGCTGAATGTAGACAGTATGGATTTCACATTGTATCAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 233 CAGGAAAAGACCCGCTGAATGTAGACAGTATGGATTTCACATTGTATCAA 282
BSNT_00492___ 301 GGTGATACCAAAATGTCTGACACAGACCCTGAAGACTATAGCGAAAAGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 283 GGTGATACCAAAATGTCTGACACAGACCCTGAAGACTATAGCGAAAAGCT 332
BSNT_00492___ 351 TCAAGTCAGCACGATTAACGCTGACAAATCCGTTGAAGGAAATCTTTTCT 400
|||.|.||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 333 TCAGGGCAGCACGATTAACGCTGACAAATCCGTTGAAGGAAATCTTTTCT 382
BSNT_00492___ 401 TCGTTGTAGATAAAGGCAAGCAATACGAGCTTAACTATACGCCGAAATCT 450
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU02780___yc 383 TCGTTGTAGATAAAGGCAAGCAATACGAGCTTAACTATACGCCGGAATCT 432
BSNT_00492___ 451 TACGGTGATAAAAAACCAAAATCAGTTACTTTTAAAATTGACGGAAAAGA 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU02780___yc 433 TACGGTGATAAAAAGCCAAAATCAGTTACTTTTAAAATTGACGGAAAAGA 482
BSNT_00492___ 501 CAAAAAAATCCTGACGACGGCAGATAAGCTCCAAGATTCTGCAAAAGCGT 550
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU02780___yc 483 CAAAAAAATCCTGGCGACGGCAGATAAGCTCCAAGATTCTGCAAAAGCGT 532
BSNT_00492___ 551 TATCAGCTTATGTTGATGTCCTTCTTTTCGGCAAAGATAACGCCGATTTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 533 TATCAGCTTATGTTGATGTCCTTCTTTTCGGCAAAGATAACGCCGATTTC 582
BSNT_00492___ 601 GAAAAAATCACCGGCGCTAACAAAAATGAAATTGTAAATGATTTCAATGA 650
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU02780___yc 583 GAAAAAATCACCGGCGCTAACAAAAATGAAATTGTAAATGATTTTAATGA 632
BSNT_00492___ 651 ATCAGCCAAAGACGGTTATCTCTCAGCTTCCGGCCTTTCCAGCACATATG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 633 ATCAGCCAAAGACGGTTATCTCTCAGCTTCCGGCCTTTCCAGCACATATG 682
BSNT_00492___ 701 CGGACAGCAAAGCGCTTGATAATATCGTGAATGGCATTAAAGAGGGATTA 750
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU02780___yc 683 CGGACAGCAAAGCGCTTGATAATATCGTGAACGGCATTAAAGAGGGATTA 732
BSNT_00492___ 751 AGCAAAAACTCTTCCATTCAAGCAAAAACGACTTCAATCTCTAAAGACGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 733 AGCAAAAACTCTTCCATTCAAGCAAAAACGACTTCAATCTCTAAAGACGA 782
BSNT_00492___ 801 AGCAATTGTTGAAGCCACAGTTAAACCTGTAGATGCATCTTCTCTTTCAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 783 AGCAATTGTTGAAGCCACAGTTAAACCTGTAGATGCATCTTCTCTTTCAG 832
BSNT_00492___ 851 ACCGCATCGAAGACAAAGTGAAAGACTACTACAGTAAAAACTCTAGTGCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 833 ACCGCATCGAAGACAAAGTGAAAGACTACTACAGTAAAAACTCTAGTGCC 882
BSNT_00492___ 901 AGCTATGAGGAGGCAGTGAAATACGCGCTTCAAGTCTATCCTGAGGAATT 950
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 883 AGCTATGAAGAGGCAGTGAAATACGCGCTTCAAGTCTATCCTGAGGAATT 932
BSNT_00492___ 951 CAAAAAGCTTGGACCTGCTTCATCTGAAAAAACAGTTGAAGTGAAAATGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 933 CAAAAAGCTTGGACCTGCTTCATCTGAAAAAACAGTTGAAGTGAAAATGA 982
BSNT_00492___ 1001 AGAAAAATGACATCGACCAATGGCAGCTTGATATGGATGATTACAGAGCA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02780___yc 983 AGAAAAATGACATCGACCAATGGCAGCTTGATATGGATGATTACAGAGCA 1032
BSNT_00492___ 1051 GCAGAATTAGTCGAAGCATTCATCAAAGAATAA 1083
|||||||||||||||||||||||||||||||||
BSU02780___yc 1033 GCAGAATTAGTCGAAGCATTCATCAAAGAATAA 1065
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