Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00484 and BSU02730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:37
# Commandline: needle
# -asequence dna-align/BSNT_00484.1.22522.seq
# -bsequence dna-align/BSU02730___natK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00484-BSU02730___natK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00484-BSU02730___natK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00484
# 2: BSU02730___natK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity: 716/957 (74.8%)
# Similarity: 716/957 (74.8%)
# Gaps: 237/957 (24.8%)
# Score: 3550.5
#
#
#=======================================
BSNT_00484 0 -------------------------------------------------- 0
BSU02730___na 1 GTGATTACCCTTTTTCAATGTCTTTATCTGATTTTATTTAGTTTCATATG 50
BSNT_00484 0 -------------------------------------------------- 0
BSU02730___na 51 TTATCAGGGAGCTGCTGCTTTTTCACACAGCACAGCCGCCTCTTGGCTCG 100
BSNT_00484 0 -------------------------------------------------- 0
BSU02730___na 101 CCGCTGCTTTAGGCGCAGCTGCTGCAGGATTGTACATTTGGAATACGAAG 150
BSNT_00484 0 -------------------------------------------------- 0
BSU02730___na 151 CGGGTGTGGAAACACTGTTCCTCAGGGCTTTGTGCGTGGATTGCGGTGAT 200
BSNT_00484 1 -----------------------------TTGGCACA--------GCCGG 13
|||||||| |||||
BSU02730___na 201 TCAAGTGATGTCGGTGGGAGTGGTGTTGATTGGCACAGACATCATGCCGG 250
BSNT_00484 14 TATTATGTGTAATCGCGATATTTGCAGGGTGTGAAGGGCTCCGTATCGGA 63
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 251 TATTATGTGTAATCGCGATATTTGCAGGGTGTGAAGGGCTCCGTATCGGA 300
BSNT_00484 64 CAGTCTGCTTTGCAGGCAAGGCTTTCTGATCAAATTGATAAGCTGACTCA 113
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 301 CAGTCTGCTTTGCAGGCAAGGCTTTCTGATCAAATTGATAAGCTGACTCA 350
BSNT_00484 114 AGCTGAACAGCACGCCAATCAAATGCTGATTGATGTCAGAAGCCGGAATC 163
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 351 AGCTGAACAGCACGCCAATCAAATGCTGATTGATGTCAGAAGCCGGAATC 400
BSNT_00484 164 ATGACACAATGAAACATATCACTGCAATCAAATCAGCTCAGCCCAAGGCA 213
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 401 ATGACACAATGAAACATATCACTGCAATCAAATCAGCTCAGCCCAAGGCA 450
BSNT_00484 214 GATACACAAGCATATATTCAAAACTGGGCGGATCAATACAGCCAATATGA 263
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 451 GATACACAAGCATATATTCAAAACTGGGCGGATCAATACAGCCAATATGA 500
BSNT_00484 264 CTGTTTTTTGAAAGGAGAGAACGCGTACATTGCAGGGGTGCTTTATGATT 313
|.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU02730___na 501 CCGTTTTTTGAAAGGAGAGAACGCGTACGTTGCAGGGGTGCTTTATGATT 550
BSNT_00484 314 TTTTAGAAAAAGCCCGCGCCTCGAATGTGAGTGTTTCGCTGCATATGCAT 363
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 551 TTTTAGAAAAAGCCCGCGCCTCGAATGTGAGTGTTTCGCTGCATATGCAT 600
BSNT_00484 364 ACACCGCTTTCTTCCCTTCCGTTTTCGCCTGCTGATCAGGTCAGCTTGGT 413
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 601 ACACCGCTTTCTTCCCTTCCGTTTTCGCCTGCTGATCAGGTCAGCTTGGT 650
BSNT_00484 414 CGGCAACATATTAGAAAATGCGCTCGACAGCGCGGCGGAGGCCCGAGAAA 463
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 651 CGGCAACATATTAGAAAATGCGCTCGACAGCGCGGCGGAGGCCCGAGAAA 700
BSNT_00484 464 AAGCAGAGATTAAACTGGAGACTTCACTGCGCAGCGGGCTTTATGTACTG 513
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 701 AAGCAGAGATTAAACTGGAGACTTCACTGCGCAGCGGGCTTTATGTACTG 750
BSNT_00484 514 ACTTGTGAAAACAGCACTCCCGGGATGGACCCAAAAGTGCTCGATACAAT 563
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 751 ACTTGTGAAAACAGCACTCCCGGGATGGACCCAAAAGTGCTCGATACAAT 800
BSNT_00484 564 TTATCAATCGTTTGGCCGCTCAACGAAAAACGGCGCTCATGAAGGCATGG 613
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02730___na 801 TTATCAATCGTTTGGCCGCTCAACGAAAAACGGCGCTCATGAAGGCATGG 850
BSNT_00484 614 GCACATATATCATTCAAAAACTGGTGAAGAGCGCTTTTGGCAGGCTGGAT 663
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU02730___na 851 GCACATATATCATTCAAAAACTGGTGAAGGGCGCTTTTGGCAGGCTGGAT 900
BSNT_00484 664 TTTACCTACCGCCACCCCGTCTTCCGGTTAGAAATCAAAATTCCGTTTCA 713
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU02730___na 901 TTTACCTACCGCCACCCCATCTTCCGGTTAGAAATCAAAATTCCGTTTCA 950
BSNT_00484 714 GAAATAA 720
|||||||
BSU02730___na 951 GAAATAA 957
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